Spatial Control of DNA Reaction Networks by DNA Sequence

We have developed a set of DNA circuits that execute during gel electrophoresis to yield immobile, fluorescent features in the gel. The parallel execution of orthogonal circuits led to the simultaneous production of different fluorescent lines at different positions in the gel. The positions of the...

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Bibliographic Details
Main Authors: Andrew D. Ellington, Xi Chen, Peter B. Allen
Format: Article
Language:English
Published: MDPI AG 2012-11-01
Series:Molecules
Subjects:
Online Access:http://www.mdpi.com/1420-3049/17/11/13390
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spelling doaj-b7878b8fd27f495caf45068df65357e82020-11-25T01:05:10ZengMDPI AGMolecules1420-30492012-11-011711133901340210.3390/molecules171113390Spatial Control of DNA Reaction Networks by DNA SequenceAndrew D. EllingtonXi ChenPeter B. AllenWe have developed a set of DNA circuits that execute during gel electrophoresis to yield immobile, fluorescent features in the gel. The parallel execution of orthogonal circuits led to the simultaneous production of different fluorescent lines at different positions in the gel. The positions of the lines could be rationally manipulated by changing the mobilities of the reactants. The ability to program at the nanoscale so as to produce patterns at the macroscale is a step towards programmable, synthetic chemical systems for generating defined spatiotemporal patterns.http://www.mdpi.com/1420-3049/17/11/13390reaction-diffusionelectrophoresischemical reaction networksDNA circuitsstrand displacement reactions
collection DOAJ
language English
format Article
sources DOAJ
author Andrew D. Ellington
Xi Chen
Peter B. Allen
spellingShingle Andrew D. Ellington
Xi Chen
Peter B. Allen
Spatial Control of DNA Reaction Networks by DNA Sequence
Molecules
reaction-diffusion
electrophoresis
chemical reaction networks
DNA circuits
strand displacement reactions
author_facet Andrew D. Ellington
Xi Chen
Peter B. Allen
author_sort Andrew D. Ellington
title Spatial Control of DNA Reaction Networks by DNA Sequence
title_short Spatial Control of DNA Reaction Networks by DNA Sequence
title_full Spatial Control of DNA Reaction Networks by DNA Sequence
title_fullStr Spatial Control of DNA Reaction Networks by DNA Sequence
title_full_unstemmed Spatial Control of DNA Reaction Networks by DNA Sequence
title_sort spatial control of dna reaction networks by dna sequence
publisher MDPI AG
series Molecules
issn 1420-3049
publishDate 2012-11-01
description We have developed a set of DNA circuits that execute during gel electrophoresis to yield immobile, fluorescent features in the gel. The parallel execution of orthogonal circuits led to the simultaneous production of different fluorescent lines at different positions in the gel. The positions of the lines could be rationally manipulated by changing the mobilities of the reactants. The ability to program at the nanoscale so as to produce patterns at the macroscale is a step towards programmable, synthetic chemical systems for generating defined spatiotemporal patterns.
topic reaction-diffusion
electrophoresis
chemical reaction networks
DNA circuits
strand displacement reactions
url http://www.mdpi.com/1420-3049/17/11/13390
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AT xichen spatialcontrolofdnareactionnetworksbydnasequence
AT peterballen spatialcontrolofdnareactionnetworksbydnasequence
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