Comparison PCR Method and Rapid Urease Test to Detect Helicobacter Pylori in the Gastric Biopsy Tissue Samples

Background & Objective: Helicobacter pylori has been recognized as a major risk factor in gastric and duodenum ulcers and gastric cancer. Some laboratory tests, such as culture, are not entirely satisfying. The aim of this study is to compare RUT with PCR in identifying H. pylori in the gastric...

Full description

Bibliographic Details
Main Authors: Parastoo Chamanrokh, Mohammad hassan Shahhosseiny, Mahnaz Mazaheri Assadi, Taher Nejadsattari, Davood Esmaili
Format: Article
Language:fas
Published: Fasa University of Medical Sciences 2013-09-01
Series:Journal of Fasa University of Medical Sciences
Subjects:
Online Access:http://journal.fums.ac.ir/browse.php?a_code=A-10-146-1&slc_lang=en&sid=1
id doaj-b7c23b243d9740b998b648f0c61a6b78
record_format Article
spelling doaj-b7c23b243d9740b998b648f0c61a6b782020-11-24T23:32:30ZfasFasa University of Medical SciencesJournal of Fasa University of Medical Sciences2228-51052228-73292013-09-0132104110Comparison PCR Method and Rapid Urease Test to Detect Helicobacter Pylori in the Gastric Biopsy Tissue SamplesParastoo ChamanrokhMohammad hassan ShahhosseinyMahnaz Mazaheri AssadiTaher NejadsattariDavood EsmailiBackground & Objective: Helicobacter pylori has been recognized as a major risk factor in gastric and duodenum ulcers and gastric cancer. Some laboratory tests, such as culture, are not entirely satisfying. The aim of this study is to compare RUT with PCR in identifying H. pylori in the gastric biopsy tissue samples.Materials & Methods: First, the standard H.pylori sample (N:oC30) was provided. primers or the glmM (ureC) gene were used In PCR method The PCR test was optimized by sensitivity and specificity methods. Then 100 clinical samples composed of stomach tissue biopsy were prepared. The rapid urease test was conducted on all obtained samples to identify H.pylori. DNA was extracted from samples using DNG plus technique. Then, samples were studied using PCR method.  Results: The 294 bp product was amplified in the optimized PCR test. The PCR test sensitivity was obtained at 10 CFU. Any unwanted products were not seen in the specificity test with the exception of H. pylori DNA samples. Of 100 stomach biopsy samples, 64% were reported as positive by RUT and 76% by the PCR test.Conclusion: Given that the PCR test has higher sensitivity and specificity to detect H.pylori comparing rapid ureaas test, therefore this method could be used to detect H.pylori.   http://journal.fums.ac.ir/browse.php?a_code=A-10-146-1&slc_lang=en&sid=1Helicobacter pyloriglmMPCR methodrapid Ureas test
collection DOAJ
language fas
format Article
sources DOAJ
author Parastoo Chamanrokh
Mohammad hassan Shahhosseiny
Mahnaz Mazaheri Assadi
Taher Nejadsattari
Davood Esmaili
spellingShingle Parastoo Chamanrokh
Mohammad hassan Shahhosseiny
Mahnaz Mazaheri Assadi
Taher Nejadsattari
Davood Esmaili
Comparison PCR Method and Rapid Urease Test to Detect Helicobacter Pylori in the Gastric Biopsy Tissue Samples
Journal of Fasa University of Medical Sciences
Helicobacter pylori
glmM
PCR method
rapid Ureas test
author_facet Parastoo Chamanrokh
Mohammad hassan Shahhosseiny
Mahnaz Mazaheri Assadi
Taher Nejadsattari
Davood Esmaili
author_sort Parastoo Chamanrokh
title Comparison PCR Method and Rapid Urease Test to Detect Helicobacter Pylori in the Gastric Biopsy Tissue Samples
title_short Comparison PCR Method and Rapid Urease Test to Detect Helicobacter Pylori in the Gastric Biopsy Tissue Samples
title_full Comparison PCR Method and Rapid Urease Test to Detect Helicobacter Pylori in the Gastric Biopsy Tissue Samples
title_fullStr Comparison PCR Method and Rapid Urease Test to Detect Helicobacter Pylori in the Gastric Biopsy Tissue Samples
title_full_unstemmed Comparison PCR Method and Rapid Urease Test to Detect Helicobacter Pylori in the Gastric Biopsy Tissue Samples
title_sort comparison pcr method and rapid urease test to detect helicobacter pylori in the gastric biopsy tissue samples
publisher Fasa University of Medical Sciences
series Journal of Fasa University of Medical Sciences
issn 2228-5105
2228-7329
publishDate 2013-09-01
description Background & Objective: Helicobacter pylori has been recognized as a major risk factor in gastric and duodenum ulcers and gastric cancer. Some laboratory tests, such as culture, are not entirely satisfying. The aim of this study is to compare RUT with PCR in identifying H. pylori in the gastric biopsy tissue samples.Materials & Methods: First, the standard H.pylori sample (N:oC30) was provided. primers or the glmM (ureC) gene were used In PCR method The PCR test was optimized by sensitivity and specificity methods. Then 100 clinical samples composed of stomach tissue biopsy were prepared. The rapid urease test was conducted on all obtained samples to identify H.pylori. DNA was extracted from samples using DNG plus technique. Then, samples were studied using PCR method.  Results: The 294 bp product was amplified in the optimized PCR test. The PCR test sensitivity was obtained at 10 CFU. Any unwanted products were not seen in the specificity test with the exception of H. pylori DNA samples. Of 100 stomach biopsy samples, 64% were reported as positive by RUT and 76% by the PCR test.Conclusion: Given that the PCR test has higher sensitivity and specificity to detect H.pylori comparing rapid ureaas test, therefore this method could be used to detect H.pylori.  
topic Helicobacter pylori
glmM
PCR method
rapid Ureas test
url http://journal.fums.ac.ir/browse.php?a_code=A-10-146-1&slc_lang=en&sid=1
work_keys_str_mv AT parastoochamanrokh comparisonpcrmethodandrapidureasetesttodetecthelicobacterpyloriinthegastricbiopsytissuesamples
AT mohammadhassanshahhosseiny comparisonpcrmethodandrapidureasetesttodetecthelicobacterpyloriinthegastricbiopsytissuesamples
AT mahnazmazaheriassadi comparisonpcrmethodandrapidureasetesttodetecthelicobacterpyloriinthegastricbiopsytissuesamples
AT tahernejadsattari comparisonpcrmethodandrapidureasetesttodetecthelicobacterpyloriinthegastricbiopsytissuesamples
AT davoodesmaili comparisonpcrmethodandrapidureasetesttodetecthelicobacterpyloriinthegastricbiopsytissuesamples
_version_ 1725533882653081600