A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction

<b>Background:</b> Drug-ethanol interaction can result in hepatotoxicity. The liver is capable of metabolizing both acetaminophen and ethanol; however, severe acute or moderate chronic simultaneous exposure can cause cell and tissue damage. Therapeutic doses can become harmful if gene ac...

Full description

Bibliographic Details
Main Authors: Bryan Hedgpeth, Roy Missall, Anna Bambaci, Matthew Smolen, Sevgi Yavuz, Jessica Cottrell, Tinchun Chu, Sulie L. Chang
Format: Article
Language:English
Published: MDPI AG 2019-07-01
Series:Medicines
Subjects:
Online Access:https://www.mdpi.com/2305-6320/6/3/79
id doaj-b892841ab48b46bfb7a560b4e556bb56
record_format Article
spelling doaj-b892841ab48b46bfb7a560b4e556bb562020-11-25T01:54:18ZengMDPI AGMedicines2305-63202019-07-01637910.3390/medicines6030079medicines6030079A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol InteractionBryan Hedgpeth0Roy Missall1Anna Bambaci2Matthew Smolen3Sevgi Yavuz4Jessica Cottrell5Tinchun Chu6Sulie L. Chang7Department of Biological Science, Seton Hall University, South Orange, NJ 07079, USADepartment of Biological Science, Seton Hall University, South Orange, NJ 07079, USADepartment of Biological Science, Seton Hall University, South Orange, NJ 07079, USADepartment of Biological Science, Seton Hall University, South Orange, NJ 07079, USADepartment of Biological Science, Seton Hall University, South Orange, NJ 07079, USADepartment of Biological Science, Seton Hall University, South Orange, NJ 07079, USADepartment of Biological Science, Seton Hall University, South Orange, NJ 07079, USADepartment of Biological Science, Seton Hall University, South Orange, NJ 07079, USA<b>Background:</b> Drug-ethanol interaction can result in hepatotoxicity. The liver is capable of metabolizing both acetaminophen and ethanol; however, severe acute or moderate chronic simultaneous exposure can cause cell and tissue damage. Therapeutic doses can become harmful if gene activity is altered via competition for metabolic pathways. Simultaneous intake of ethanol and acetaminophen results in overactive CYP2E1 and depletion of glutathione, leaving NAPQI to build up in the liver. NAPQI is a hepatotoxic substance typically neutralized by glutathione. <b>Methods:</b> Bioinformatics tools including PharmGKB, Chemical Annotation Retrieval Toolkit, Transcriptome Analysis Console 4.0 (TAC), wikipathways, STRING, and Ingenuity Pathway Analysis (IPA) were used to explore interactive metabolic pathways of ethanol-acetaminophen exposure as a proof of concept for assessing drug-drug or drug-alcohol interactions. <b>Results:</b> As the ethanol-acetaminophen comparison indicates, bioinformatics tools may be used to understand interactive pathways following exposure to ethanol and acetaminophen, with potential extrapolation to other drug-drug/drug-ethanol interactions. <b>Conclusions:</b> Direct interactive effects were not able to be confirmed through this bioinformatics study due to the lack of existing ethanol-acetaminophen simultaneous exposure data. This work suggests that a battery of software applications should be used to assess interactive effects.https://www.mdpi.com/2305-6320/6/3/79alcoholdrug-ethanol interactionacetaminophenbioinformaticspathways
collection DOAJ
language English
format Article
sources DOAJ
author Bryan Hedgpeth
Roy Missall
Anna Bambaci
Matthew Smolen
Sevgi Yavuz
Jessica Cottrell
Tinchun Chu
Sulie L. Chang
spellingShingle Bryan Hedgpeth
Roy Missall
Anna Bambaci
Matthew Smolen
Sevgi Yavuz
Jessica Cottrell
Tinchun Chu
Sulie L. Chang
A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
Medicines
alcohol
drug-ethanol interaction
acetaminophen
bioinformatics
pathways
author_facet Bryan Hedgpeth
Roy Missall
Anna Bambaci
Matthew Smolen
Sevgi Yavuz
Jessica Cottrell
Tinchun Chu
Sulie L. Chang
author_sort Bryan Hedgpeth
title A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
title_short A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
title_full A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
title_fullStr A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
title_full_unstemmed A Review of Bioinformatics Tools to Understand Acetaminophen-Alcohol Interaction
title_sort review of bioinformatics tools to understand acetaminophen-alcohol interaction
publisher MDPI AG
series Medicines
issn 2305-6320
publishDate 2019-07-01
description <b>Background:</b> Drug-ethanol interaction can result in hepatotoxicity. The liver is capable of metabolizing both acetaminophen and ethanol; however, severe acute or moderate chronic simultaneous exposure can cause cell and tissue damage. Therapeutic doses can become harmful if gene activity is altered via competition for metabolic pathways. Simultaneous intake of ethanol and acetaminophen results in overactive CYP2E1 and depletion of glutathione, leaving NAPQI to build up in the liver. NAPQI is a hepatotoxic substance typically neutralized by glutathione. <b>Methods:</b> Bioinformatics tools including PharmGKB, Chemical Annotation Retrieval Toolkit, Transcriptome Analysis Console 4.0 (TAC), wikipathways, STRING, and Ingenuity Pathway Analysis (IPA) were used to explore interactive metabolic pathways of ethanol-acetaminophen exposure as a proof of concept for assessing drug-drug or drug-alcohol interactions. <b>Results:</b> As the ethanol-acetaminophen comparison indicates, bioinformatics tools may be used to understand interactive pathways following exposure to ethanol and acetaminophen, with potential extrapolation to other drug-drug/drug-ethanol interactions. <b>Conclusions:</b> Direct interactive effects were not able to be confirmed through this bioinformatics study due to the lack of existing ethanol-acetaminophen simultaneous exposure data. This work suggests that a battery of software applications should be used to assess interactive effects.
topic alcohol
drug-ethanol interaction
acetaminophen
bioinformatics
pathways
url https://www.mdpi.com/2305-6320/6/3/79
work_keys_str_mv AT bryanhedgpeth areviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT roymissall areviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT annabambaci areviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT matthewsmolen areviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT sevgiyavuz areviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT jessicacottrell areviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT tinchunchu areviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT sulielchang areviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT bryanhedgpeth reviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT roymissall reviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT annabambaci reviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT matthewsmolen reviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT sevgiyavuz reviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT jessicacottrell reviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT tinchunchu reviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
AT sulielchang reviewofbioinformaticstoolstounderstandacetaminophenalcoholinteraction
_version_ 1724988006542082048