Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts

The pathogenesis of age-related macular degeneration (AMD), a leading cause of blindness worldwide, remains only partially understood. This has led to the current lack of accessible and reliable biofluid biomarkers for diagnosis and prognosis, and absence of treatments for dry AMD. This study aimed...

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Main Authors: Inês Laíns, Wonil Chung, Rachel S. Kelly, João Gil, Marco Marques, Patrícia Barreto, Joaquim N. Murta, Ivana K. Kim, Demetrios G. Vavvas, John B. Miller, Rufino Silva, Jessica Lasky-Su, Liming Liang, Joan W. Miller, Deeba Husain
Format: Article
Language:English
Published: MDPI AG 2019-07-01
Series:Metabolites
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Online Access:https://www.mdpi.com/2218-1989/9/7/127
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spelling doaj-b8c397ed4de94515af0b6a8d33d894bd2020-11-24T22:09:32ZengMDPI AGMetabolites2218-19892019-07-019712710.3390/metabo9070127metabo9070127Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two CohortsInês Laíns0Wonil Chung1Rachel S. Kelly2João Gil3Marco Marques4Patrícia Barreto5Joaquim N. Murta6Ivana K. Kim7Demetrios G. Vavvas8John B. Miller9Rufino Silva10Jessica Lasky-Su11Liming Liang12Joan W. Miller13Deeba Husain14Department of Ophthalmology, Massachusetts Eye and Ear, Harvard Medical School, Boston, MA 02114, USAProgram in Genetic Epidemiology and Statistical Genetics, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USASystems Genetics and Genomics Unit, Channing Division of Network Medicine Brigham and Women’s Hospital and Harvard Medical School, Boston, MA 02115, USAFaculty of Medicine, University of Coimbra, 3000 Coimbra, PortugalFaculty of Medicine, University of Coimbra, 3000 Coimbra, PortugalAssociation for Innovation and Biomedical Research on Light and Image, 3000 Coimbra, PortugalFaculty of Medicine, University of Coimbra, 3000 Coimbra, PortugalDepartment of Ophthalmology, Massachusetts Eye and Ear, Harvard Medical School, Boston, MA 02114, USADepartment of Ophthalmology, Massachusetts Eye and Ear, Harvard Medical School, Boston, MA 02114, USADepartment of Ophthalmology, Massachusetts Eye and Ear, Harvard Medical School, Boston, MA 02114, USAFaculty of Medicine, University of Coimbra, 3000 Coimbra, PortugalSystems Genetics and Genomics Unit, Channing Division of Network Medicine Brigham and Women’s Hospital and Harvard Medical School, Boston, MA 02115, USAProgram in Genetic Epidemiology and Statistical Genetics, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USADepartment of Ophthalmology, Massachusetts Eye and Ear, Harvard Medical School, Boston, MA 02114, USADepartment of Ophthalmology, Massachusetts Eye and Ear, Harvard Medical School, Boston, MA 02114, USAThe pathogenesis of age-related macular degeneration (AMD), a leading cause of blindness worldwide, remains only partially understood. This has led to the current lack of accessible and reliable biofluid biomarkers for diagnosis and prognosis, and absence of treatments for dry AMD. This study aimed to assess the plasma metabolomic profiles of AMD and its severity stages with the ultimate goal of contributing to addressing these needs. We recruited two cohorts: Boston, United States (<i>n</i> = 196) and Coimbra, Portugal (<i>n</i> = 295). Fasting blood samples were analyzed using ultra-high performance liquid chromatography mass spectrometry. For each cohort, we compared plasma metabolites of AMD patients versus controls (logistic regression), and across disease stages (permutation-based cumulative logistic regression considering both eyes). Meta-analyses were then used to combine results from the two cohorts. Our results revealed that 28 metabolites differed significantly between AMD patients versus controls (false discovery rate (FDR) <i>q</i>-value: 4.1 &#215; 10<sup>&#8722;2</sup>&#8722;1.8 &#215; 10<sup>&#8722;5</sup>), and 67 across disease stages (FDR <i>q</i>-value: 4.5 &#215; 10<sup>&#8722;2</sup>&#8722;1.7 &#215; 10<sup>&#8722;4</sup>). Pathway analysis showed significant enrichment of glycerophospholipid, purine, taurine and hypotaurine, and nitrogen metabolism (<i>p</i>-value &#8804; 0.04). In conclusion, our findings support that AMD patients present distinct plasma metabolomic profiles, which vary with disease severity. This work contributes to the understanding of AMD pathophysiology, and can be the basis of future biomarkers and precision medicine for this blinding condition.https://www.mdpi.com/2218-1989/9/7/127age-related macular degenerationmetabolomicsmass spectrometry
collection DOAJ
language English
format Article
sources DOAJ
author Inês Laíns
Wonil Chung
Rachel S. Kelly
João Gil
Marco Marques
Patrícia Barreto
Joaquim N. Murta
Ivana K. Kim
Demetrios G. Vavvas
John B. Miller
Rufino Silva
Jessica Lasky-Su
Liming Liang
Joan W. Miller
Deeba Husain
spellingShingle Inês Laíns
Wonil Chung
Rachel S. Kelly
João Gil
Marco Marques
Patrícia Barreto
Joaquim N. Murta
Ivana K. Kim
Demetrios G. Vavvas
John B. Miller
Rufino Silva
Jessica Lasky-Su
Liming Liang
Joan W. Miller
Deeba Husain
Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
Metabolites
age-related macular degeneration
metabolomics
mass spectrometry
author_facet Inês Laíns
Wonil Chung
Rachel S. Kelly
João Gil
Marco Marques
Patrícia Barreto
Joaquim N. Murta
Ivana K. Kim
Demetrios G. Vavvas
John B. Miller
Rufino Silva
Jessica Lasky-Su
Liming Liang
Joan W. Miller
Deeba Husain
author_sort Inês Laíns
title Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
title_short Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
title_full Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
title_fullStr Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
title_full_unstemmed Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
title_sort human plasma metabolomics in age-related macular degeneration: meta-analysis of two cohorts
publisher MDPI AG
series Metabolites
issn 2218-1989
publishDate 2019-07-01
description The pathogenesis of age-related macular degeneration (AMD), a leading cause of blindness worldwide, remains only partially understood. This has led to the current lack of accessible and reliable biofluid biomarkers for diagnosis and prognosis, and absence of treatments for dry AMD. This study aimed to assess the plasma metabolomic profiles of AMD and its severity stages with the ultimate goal of contributing to addressing these needs. We recruited two cohorts: Boston, United States (<i>n</i> = 196) and Coimbra, Portugal (<i>n</i> = 295). Fasting blood samples were analyzed using ultra-high performance liquid chromatography mass spectrometry. For each cohort, we compared plasma metabolites of AMD patients versus controls (logistic regression), and across disease stages (permutation-based cumulative logistic regression considering both eyes). Meta-analyses were then used to combine results from the two cohorts. Our results revealed that 28 metabolites differed significantly between AMD patients versus controls (false discovery rate (FDR) <i>q</i>-value: 4.1 &#215; 10<sup>&#8722;2</sup>&#8722;1.8 &#215; 10<sup>&#8722;5</sup>), and 67 across disease stages (FDR <i>q</i>-value: 4.5 &#215; 10<sup>&#8722;2</sup>&#8722;1.7 &#215; 10<sup>&#8722;4</sup>). Pathway analysis showed significant enrichment of glycerophospholipid, purine, taurine and hypotaurine, and nitrogen metabolism (<i>p</i>-value &#8804; 0.04). In conclusion, our findings support that AMD patients present distinct plasma metabolomic profiles, which vary with disease severity. This work contributes to the understanding of AMD pathophysiology, and can be the basis of future biomarkers and precision medicine for this blinding condition.
topic age-related macular degeneration
metabolomics
mass spectrometry
url https://www.mdpi.com/2218-1989/9/7/127
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