Revisiting antithrombotic therapeutics; sculptin, a novel specific, competitive, reversible, scissile and tight binding inhibitor of thrombin

Abstract Thrombin is a multifunctional enzyme with a key role in the coagulation cascade. Its functional modulation can culminate into normal blood coagulation or thrombosis. Thus, the identification of novel potent inhibitors of thrombin are of immense importance. Sculptin is the first specific thr...

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Main Authors: Asif Iqbal, Mauricio Barbugiani Goldfeder, Rafael Marques-Porto, Huma Asif, Jean Gabriel de Souza, Fernanda Faria, Ana Marisa Chudzinski-Tavassi
Format: Article
Language:English
Published: Nature Publishing Group 2017-05-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-017-01486-w
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spelling doaj-ba1295f0327f41e988619873c275f4322020-12-08T03:19:17ZengNature Publishing GroupScientific Reports2045-23222017-05-017111410.1038/s41598-017-01486-wRevisiting antithrombotic therapeutics; sculptin, a novel specific, competitive, reversible, scissile and tight binding inhibitor of thrombinAsif Iqbal0Mauricio Barbugiani Goldfeder1Rafael Marques-Porto2Huma Asif3Jean Gabriel de Souza4Fernanda Faria5Ana Marisa Chudzinski-Tavassi6Laboratory of Biochemistry and Biophysics, Butantan InstituteLaboratory of Biochemistry and Biophysics, Butantan InstituteLaboratory of Biochemistry and Biophysics, Butantan InstituteLaboratory of Gene Expression in Eukaryotes, Butantan InstituteLaboratory of Biochemistry and Biophysics, Butantan InstituteLaboratory of Biochemistry and Biophysics, Butantan InstituteLaboratory of Biochemistry and Biophysics, Butantan InstituteAbstract Thrombin is a multifunctional enzyme with a key role in the coagulation cascade. Its functional modulation can culminate into normal blood coagulation or thrombosis. Thus, the identification of novel potent inhibitors of thrombin are of immense importance. Sculptin is the first specific thrombin inhibitor identified in the transcriptomics analysis of tick’s salivary glands. It consists of 168 residues having four similar repeats and evolutionary diverged from hirudin. Sculptin is a competitive, specific and reversible inhibitor of thrombin with a Ki of 18.3 ± 1.9 pM (k on 4.04 ± 0.03 × 107 M−1 s−1 and k off 0.65 ± 0.04 × 10−3 s−1). It is slowly consumed by thrombin eventually losing its activity. Contrary, sculptin is hydrolyzed by factor Xa and each polypeptide fragment is able to inhibit thrombin independently. A single domain of sculptin alone retains ~45% of inhibitory activity, which could bind thrombin in a bivalent fashion. The formation of a small turn/helical-like structure by active site binding residues of sculptin might have made it a more potent thrombin inhibitor. In addition, sculptin prolongs global coagulation parameters. In conclusion, sculptin and its independent domain(s) have strong potential to become novel antithrombotic therapeutics.https://doi.org/10.1038/s41598-017-01486-w
collection DOAJ
language English
format Article
sources DOAJ
author Asif Iqbal
Mauricio Barbugiani Goldfeder
Rafael Marques-Porto
Huma Asif
Jean Gabriel de Souza
Fernanda Faria
Ana Marisa Chudzinski-Tavassi
spellingShingle Asif Iqbal
Mauricio Barbugiani Goldfeder
Rafael Marques-Porto
Huma Asif
Jean Gabriel de Souza
Fernanda Faria
Ana Marisa Chudzinski-Tavassi
Revisiting antithrombotic therapeutics; sculptin, a novel specific, competitive, reversible, scissile and tight binding inhibitor of thrombin
Scientific Reports
author_facet Asif Iqbal
Mauricio Barbugiani Goldfeder
Rafael Marques-Porto
Huma Asif
Jean Gabriel de Souza
Fernanda Faria
Ana Marisa Chudzinski-Tavassi
author_sort Asif Iqbal
title Revisiting antithrombotic therapeutics; sculptin, a novel specific, competitive, reversible, scissile and tight binding inhibitor of thrombin
title_short Revisiting antithrombotic therapeutics; sculptin, a novel specific, competitive, reversible, scissile and tight binding inhibitor of thrombin
title_full Revisiting antithrombotic therapeutics; sculptin, a novel specific, competitive, reversible, scissile and tight binding inhibitor of thrombin
title_fullStr Revisiting antithrombotic therapeutics; sculptin, a novel specific, competitive, reversible, scissile and tight binding inhibitor of thrombin
title_full_unstemmed Revisiting antithrombotic therapeutics; sculptin, a novel specific, competitive, reversible, scissile and tight binding inhibitor of thrombin
title_sort revisiting antithrombotic therapeutics; sculptin, a novel specific, competitive, reversible, scissile and tight binding inhibitor of thrombin
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2017-05-01
description Abstract Thrombin is a multifunctional enzyme with a key role in the coagulation cascade. Its functional modulation can culminate into normal blood coagulation or thrombosis. Thus, the identification of novel potent inhibitors of thrombin are of immense importance. Sculptin is the first specific thrombin inhibitor identified in the transcriptomics analysis of tick’s salivary glands. It consists of 168 residues having four similar repeats and evolutionary diverged from hirudin. Sculptin is a competitive, specific and reversible inhibitor of thrombin with a Ki of 18.3 ± 1.9 pM (k on 4.04 ± 0.03 × 107 M−1 s−1 and k off 0.65 ± 0.04 × 10−3 s−1). It is slowly consumed by thrombin eventually losing its activity. Contrary, sculptin is hydrolyzed by factor Xa and each polypeptide fragment is able to inhibit thrombin independently. A single domain of sculptin alone retains ~45% of inhibitory activity, which could bind thrombin in a bivalent fashion. The formation of a small turn/helical-like structure by active site binding residues of sculptin might have made it a more potent thrombin inhibitor. In addition, sculptin prolongs global coagulation parameters. In conclusion, sculptin and its independent domain(s) have strong potential to become novel antithrombotic therapeutics.
url https://doi.org/10.1038/s41598-017-01486-w
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