α/β coiled coils

Coiled coils are the best-understood protein fold, as their backbone structure can uniquely be described by parametric equations. This level of understanding has allowed their manipulation in unprecedented detail. They do not seem a likely source of surprises, yet we describe here the unexpected for...

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Main Authors: Marcus D Hartmann, Claudia T Mendler, Jens Bassler, Ioanna Karamichali, Oswin Ridderbusch, Andrei N Lupas, Birte Hernandez Alvarez
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2016-01-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/11861
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spelling doaj-bacd4c1864cb498a8575e4279f309a772021-05-05T00:13:05ZengeLife Sciences Publications LtdeLife2050-084X2016-01-01510.7554/eLife.11861α/β coiled coilsMarcus D Hartmann0https://orcid.org/0000-0001-6937-5677Claudia T Mendler1Jens Bassler2Ioanna Karamichali3Oswin Ridderbusch4Andrei N Lupas5https://orcid.org/0000-0002-1959-4836Birte Hernandez Alvarez6Department of Protein Evolution, Max Planck Institute for Developmental Biology, Tübingen, GermanyDepartment of Protein Evolution, Max Planck Institute for Developmental Biology, Tübingen, GermanyDepartment of Protein Evolution, Max Planck Institute for Developmental Biology, Tübingen, GermanyDepartment of Protein Evolution, Max Planck Institute for Developmental Biology, Tübingen, GermanyDepartment of Protein Evolution, Max Planck Institute for Developmental Biology, Tübingen, GermanyDepartment of Protein Evolution, Max Planck Institute for Developmental Biology, Tübingen, GermanyDepartment of Protein Evolution, Max Planck Institute for Developmental Biology, Tübingen, GermanyCoiled coils are the best-understood protein fold, as their backbone structure can uniquely be described by parametric equations. This level of understanding has allowed their manipulation in unprecedented detail. They do not seem a likely source of surprises, yet we describe here the unexpected formation of a new type of fiber by the simple insertion of two or six residues into the underlying heptad repeat of a parallel, trimeric coiled coil. These insertions strain the supercoil to the breaking point, causing the local formation of short β-strands, which move the path of the chain by 120° around the trimer axis. The result is an α/β coiled coil, which retains only one backbone hydrogen bond per repeat unit from the parent coiled coil. Our results show that a substantially novel backbone structure is possible within the allowed regions of the Ramachandran space with only minor mutations to a known fold.https://elifesciences.org/articles/11861α-helixfiberheptad repeatsequence periodicitysupercoil
collection DOAJ
language English
format Article
sources DOAJ
author Marcus D Hartmann
Claudia T Mendler
Jens Bassler
Ioanna Karamichali
Oswin Ridderbusch
Andrei N Lupas
Birte Hernandez Alvarez
spellingShingle Marcus D Hartmann
Claudia T Mendler
Jens Bassler
Ioanna Karamichali
Oswin Ridderbusch
Andrei N Lupas
Birte Hernandez Alvarez
α/β coiled coils
eLife
α-helix
fiber
heptad repeat
sequence periodicity
supercoil
author_facet Marcus D Hartmann
Claudia T Mendler
Jens Bassler
Ioanna Karamichali
Oswin Ridderbusch
Andrei N Lupas
Birte Hernandez Alvarez
author_sort Marcus D Hartmann
title α/β coiled coils
title_short α/β coiled coils
title_full α/β coiled coils
title_fullStr α/β coiled coils
title_full_unstemmed α/β coiled coils
title_sort α/β coiled coils
publisher eLife Sciences Publications Ltd
series eLife
issn 2050-084X
publishDate 2016-01-01
description Coiled coils are the best-understood protein fold, as their backbone structure can uniquely be described by parametric equations. This level of understanding has allowed their manipulation in unprecedented detail. They do not seem a likely source of surprises, yet we describe here the unexpected formation of a new type of fiber by the simple insertion of two or six residues into the underlying heptad repeat of a parallel, trimeric coiled coil. These insertions strain the supercoil to the breaking point, causing the local formation of short β-strands, which move the path of the chain by 120° around the trimer axis. The result is an α/β coiled coil, which retains only one backbone hydrogen bond per repeat unit from the parent coiled coil. Our results show that a substantially novel backbone structure is possible within the allowed regions of the Ramachandran space with only minor mutations to a known fold.
topic α-helix
fiber
heptad repeat
sequence periodicity
supercoil
url https://elifesciences.org/articles/11861
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AT claudiatmendler abcoiledcoils
AT jensbassler abcoiledcoils
AT ioannakaramichali abcoiledcoils
AT oswinridderbusch abcoiledcoils
AT andreinlupas abcoiledcoils
AT birtehernandezalvarez abcoiledcoils
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