DDK Has a Primary Role in Processing Stalled Replication Forks to Initiate Downstream Checkpoint Signaling

Summary: CDC7-DBF4 kinase (DDK) initiates DNA replication in eukaryotes by activating the replicative MCM helicase. DDK has diverse and apparently conflicting roles in the replication checkpoint response in various organisms, but the underlying mechanisms are far from settled. We show that human DDK...

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Main Authors: Nanda Kumar Sasi, Flavie Coquel, Yea-Lih Lin, Jeffrey P MacKeigan, Philippe Pasero, Michael Weinreich
Format: Article
Language:English
Published: Elsevier 2018-10-01
Series:Neoplasia: An International Journal for Oncology Research
Online Access:http://www.sciencedirect.com/science/article/pii/S1476558618302331
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spelling doaj-bb1c67a26bea41f6b90ce1548bb39b942020-11-25T00:31:53ZengElsevierNeoplasia: An International Journal for Oncology Research1476-55862018-10-012010985995DDK Has a Primary Role in Processing Stalled Replication Forks to Initiate Downstream Checkpoint SignalingNanda Kumar Sasi0Flavie Coquel1Yea-Lih Lin2Jeffrey P MacKeigan3Philippe Pasero4Michael Weinreich5Laboratory of Genome Integrity and Tumorigenesis, Van Andel Research Institute (VARI), Grand Rapids, MI 49503; Laboratory of Systems Biology, VARI; Graduate Program in Genetics, Michigan State University, East Lansing, MI 48824IGH, Institute of Human Genetics CNRS UMR 9002 and University of Montpellier, Equipe Labellisée Ligue contre le Cancer, 141 rue de la Cardonille 34396 Cedex 5, Montpellier, FranceIGH, Institute of Human Genetics CNRS UMR 9002 and University of Montpellier, Equipe Labellisée Ligue contre le Cancer, 141 rue de la Cardonille 34396 Cedex 5, Montpellier, FranceLaboratory of Systems Biology, VARIIGH, Institute of Human Genetics CNRS UMR 9002 and University of Montpellier, Equipe Labellisée Ligue contre le Cancer, 141 rue de la Cardonille 34396 Cedex 5, Montpellier, FranceLaboratory of Genome Integrity and Tumorigenesis, Van Andel Research Institute (VARI), Grand Rapids, MI 49503; Address all correspondence to: Michael Weinreich, PhD, Van Andel Research Institute, 333 Bostwick Ave. NE, Grand Rapids, MI 49503, USA.Summary: CDC7-DBF4 kinase (DDK) initiates DNA replication in eukaryotes by activating the replicative MCM helicase. DDK has diverse and apparently conflicting roles in the replication checkpoint response in various organisms, but the underlying mechanisms are far from settled. We show that human DDK promotes limited resection of newly synthesized DNA at stalled replication forks or sites of DNA damage to initiate replication checkpoint signaling. DDK is also required for efficient fork restart and G2/M cell cycle arrest. DDK exhibits genetic interactions with the ssDNA exonuclease EXO1 and phosphorylates EXO1 in vitro. EXO1 is also required for nascent strand degradation following exposure to HU, so DDK might regulate EXO1 directly. Lastly, sublethal DDK inhibition causes various mitotic abnormalities, which is consistent with a checkpoint deficiency. In summary, DDK has a primary and previously undescribed role in the replication checkpoint to promote ssDNA accumulation at stalled forks, which is required to initiate a robust checkpoint response and cell cycle arrest to maintain genome integrity.http://www.sciencedirect.com/science/article/pii/S1476558618302331
collection DOAJ
language English
format Article
sources DOAJ
author Nanda Kumar Sasi
Flavie Coquel
Yea-Lih Lin
Jeffrey P MacKeigan
Philippe Pasero
Michael Weinreich
spellingShingle Nanda Kumar Sasi
Flavie Coquel
Yea-Lih Lin
Jeffrey P MacKeigan
Philippe Pasero
Michael Weinreich
DDK Has a Primary Role in Processing Stalled Replication Forks to Initiate Downstream Checkpoint Signaling
Neoplasia: An International Journal for Oncology Research
author_facet Nanda Kumar Sasi
Flavie Coquel
Yea-Lih Lin
Jeffrey P MacKeigan
Philippe Pasero
Michael Weinreich
author_sort Nanda Kumar Sasi
title DDK Has a Primary Role in Processing Stalled Replication Forks to Initiate Downstream Checkpoint Signaling
title_short DDK Has a Primary Role in Processing Stalled Replication Forks to Initiate Downstream Checkpoint Signaling
title_full DDK Has a Primary Role in Processing Stalled Replication Forks to Initiate Downstream Checkpoint Signaling
title_fullStr DDK Has a Primary Role in Processing Stalled Replication Forks to Initiate Downstream Checkpoint Signaling
title_full_unstemmed DDK Has a Primary Role in Processing Stalled Replication Forks to Initiate Downstream Checkpoint Signaling
title_sort ddk has a primary role in processing stalled replication forks to initiate downstream checkpoint signaling
publisher Elsevier
series Neoplasia: An International Journal for Oncology Research
issn 1476-5586
publishDate 2018-10-01
description Summary: CDC7-DBF4 kinase (DDK) initiates DNA replication in eukaryotes by activating the replicative MCM helicase. DDK has diverse and apparently conflicting roles in the replication checkpoint response in various organisms, but the underlying mechanisms are far from settled. We show that human DDK promotes limited resection of newly synthesized DNA at stalled replication forks or sites of DNA damage to initiate replication checkpoint signaling. DDK is also required for efficient fork restart and G2/M cell cycle arrest. DDK exhibits genetic interactions with the ssDNA exonuclease EXO1 and phosphorylates EXO1 in vitro. EXO1 is also required for nascent strand degradation following exposure to HU, so DDK might regulate EXO1 directly. Lastly, sublethal DDK inhibition causes various mitotic abnormalities, which is consistent with a checkpoint deficiency. In summary, DDK has a primary and previously undescribed role in the replication checkpoint to promote ssDNA accumulation at stalled forks, which is required to initiate a robust checkpoint response and cell cycle arrest to maintain genome integrity.
url http://www.sciencedirect.com/science/article/pii/S1476558618302331
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