Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer

Abstract Radiomics is a method to mine large numbers of quantitative imaging features and develop predictive models. It has shown exciting promise for improved cancer decision support from early detection to personalized precision treatment, and therefore offers a desirable new direction for pancrea...

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Main Authors: Jeffrey Wong, Michael Baine, Sarah Wisnoskie, Nathan Bennion, Dechun Zheng, Lei Yu, Vipin Dalal, Michael A. Hollingsworth, Chi Lin, Dandan Zheng
Format: Article
Language:English
Published: Nature Publishing Group 2021-08-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-021-95152-x
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spelling doaj-bcdb7caa7f194e2184b552cfd4028e592021-08-15T11:25:28ZengNature Publishing GroupScientific Reports2045-23222021-08-0111111210.1038/s41598-021-95152-xEffects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancerJeffrey Wong0Michael Baine1Sarah Wisnoskie2Nathan Bennion3Dechun Zheng4Lei Yu5Vipin Dalal6Michael A. Hollingsworth7Chi Lin8Dandan Zheng9Department of Radiation Oncology, University of Nebraska Medical CenterDepartment of Radiation Oncology, University of Nebraska Medical CenterDepartment of Radiation Oncology, University of Nebraska Medical CenterDepartment of Radiation Oncology, University of Nebraska Medical CenterDepartment of Radiology, Fujian Medical University Cancer HospitalDepartment of Radiology, University of Nebraska Medical CenterDepartment of Biochemistry and Molecular Biology, University of Nebraska Medical CenterEppley Institute for Research in Cancer, University of Nebraska Medical CenterDepartment of Radiation Oncology, University of Nebraska Medical CenterDepartment of Radiation Oncology, University of Nebraska Medical CenterAbstract Radiomics is a method to mine large numbers of quantitative imaging features and develop predictive models. It has shown exciting promise for improved cancer decision support from early detection to personalized precision treatment, and therefore offers a desirable new direction for pancreatic cancer where the mortality remains high despite the current care and intense research. For radiomics, interobserver segmentation variability and its effect on radiomic feature stability is a crucial consideration. While investigations have been reported for high-contrast cancer sites such as lung cancer, no studies to date have investigated it on CT-based radiomics for pancreatic cancer. With three radiation oncology observers and three radiology observers independently contouring on the contrast CT of 21 pancreatic cancer patients, we conducted the first interobserver segmentation variability study on CT-based radiomics for pancreatic cancer. Moreover, our novel investigation assessed whether there exists an interdisciplinary difference between the two disciplines. For each patient, a consensus tumor volume was generated using the simultaneous truth and performance level expectation algorithm, using the dice similarity coefficient (DSC) to assess each observer’s delineation against the consensus volume. Radiation oncology observers showed a higher average DSC of 0.81 ± 0.06 than the radiology observers at 0.69 ± 0.16 (p = 0.002). On a panel of 1277 radiomic features, the intraclass correlation coefficients (ICC) was calculated for all observers and those of each discipline. Large variations of ICCs were observed for different radiomic features, but ICCs were generally higher for the radiation oncology group than for the radiology group. Applying a threshold of ICC > 0.75 for considering a feature as stable, 448 features (35%) were found stable for the radiation oncology group and 214 features (16%) were stable from the radiology group. Among them, 205 features were found stable for both groups. Our results provide information for interobserver segmentation variability and its effect on CT-based radiomics for pancreatic cancer. An interesting interdisciplinary variability found in this study also introduces new considerations for the deployment of radiomics models.https://doi.org/10.1038/s41598-021-95152-x
collection DOAJ
language English
format Article
sources DOAJ
author Jeffrey Wong
Michael Baine
Sarah Wisnoskie
Nathan Bennion
Dechun Zheng
Lei Yu
Vipin Dalal
Michael A. Hollingsworth
Chi Lin
Dandan Zheng
spellingShingle Jeffrey Wong
Michael Baine
Sarah Wisnoskie
Nathan Bennion
Dechun Zheng
Lei Yu
Vipin Dalal
Michael A. Hollingsworth
Chi Lin
Dandan Zheng
Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
Scientific Reports
author_facet Jeffrey Wong
Michael Baine
Sarah Wisnoskie
Nathan Bennion
Dechun Zheng
Lei Yu
Vipin Dalal
Michael A. Hollingsworth
Chi Lin
Dandan Zheng
author_sort Jeffrey Wong
title Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
title_short Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
title_full Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
title_fullStr Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
title_full_unstemmed Effects of interobserver and interdisciplinary segmentation variabilities on CT-based radiomics for pancreatic cancer
title_sort effects of interobserver and interdisciplinary segmentation variabilities on ct-based radiomics for pancreatic cancer
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2021-08-01
description Abstract Radiomics is a method to mine large numbers of quantitative imaging features and develop predictive models. It has shown exciting promise for improved cancer decision support from early detection to personalized precision treatment, and therefore offers a desirable new direction for pancreatic cancer where the mortality remains high despite the current care and intense research. For radiomics, interobserver segmentation variability and its effect on radiomic feature stability is a crucial consideration. While investigations have been reported for high-contrast cancer sites such as lung cancer, no studies to date have investigated it on CT-based radiomics for pancreatic cancer. With three radiation oncology observers and three radiology observers independently contouring on the contrast CT of 21 pancreatic cancer patients, we conducted the first interobserver segmentation variability study on CT-based radiomics for pancreatic cancer. Moreover, our novel investigation assessed whether there exists an interdisciplinary difference between the two disciplines. For each patient, a consensus tumor volume was generated using the simultaneous truth and performance level expectation algorithm, using the dice similarity coefficient (DSC) to assess each observer’s delineation against the consensus volume. Radiation oncology observers showed a higher average DSC of 0.81 ± 0.06 than the radiology observers at 0.69 ± 0.16 (p = 0.002). On a panel of 1277 radiomic features, the intraclass correlation coefficients (ICC) was calculated for all observers and those of each discipline. Large variations of ICCs were observed for different radiomic features, but ICCs were generally higher for the radiation oncology group than for the radiology group. Applying a threshold of ICC > 0.75 for considering a feature as stable, 448 features (35%) were found stable for the radiation oncology group and 214 features (16%) were stable from the radiology group. Among them, 205 features were found stable for both groups. Our results provide information for interobserver segmentation variability and its effect on CT-based radiomics for pancreatic cancer. An interesting interdisciplinary variability found in this study also introduces new considerations for the deployment of radiomics models.
url https://doi.org/10.1038/s41598-021-95152-x
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