Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreak

Backgrounds: An ongoing outbreak of a novel coronavirus (2019-nCoV) pneumonia hit a major city in China, Wuhan, December 2019 and subsequently reached other provinces/regions of China and other countries. We present estimates of the basic reproduction number, R0, of 2019-nCoV in the early phase of t...

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Main Authors: Shi Zhao, Qianyin Lin, Jinjun Ran, Salihu S. Musa, Guangpu Yang, Weiming Wang, Yijun Lou, Daozhou Gao, Lin Yang, Daihai He, Maggie H. Wang
Format: Article
Language:English
Published: Elsevier 2020-03-01
Series:International Journal of Infectious Diseases
Online Access:http://www.sciencedirect.com/science/article/pii/S1201971220300539
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spelling doaj-bd6c343cc4524609b1bb9ed4d7cde2002020-11-25T01:24:56ZengElsevierInternational Journal of Infectious Diseases1201-97122020-03-0192214217Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreakShi Zhao0Qianyin Lin1Jinjun Ran2Salihu S. Musa3Guangpu Yang4Weiming Wang5Yijun Lou6Daozhou Gao7Lin Yang8Daihai He9Maggie H. Wang10JC School of Public Health and Primary Care, Chinese University of Hong Kong, Hong Kong, China; Shenzhen Research Institute of Chinese University of Hong Kong, Shenzhen, China; Corresponding authors.Michigan Institute for Data Science, University of Michigan, Ann Arbor, MI, USASchool of Public Health, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong, ChinaDepartment of Applied Mathematics, Hong Kong Polytechnic University, Hong Kong, ChinaDepartment of Orthopaedics and Traumatology, Chinese University of Hong Kong, Hong Kong, China; SH Ho Scoliosis Research Lab, Joint Scoliosis Research Center of Chinese University of Hong Kong and Nanjing University, Hong Kong, ChinaSchool of Mathematics and Statistics, Huaiyin Normal University, Huaian, China; Corresponding authors.Department of Applied Mathematics, Hong Kong Polytechnic University, Hong Kong, ChinaDepartment of Mathematics, Shanghai Normal University, Shanghai, ChinaSchool of Nursing, Hong Kong Polytechnic University, Hong Kong, ChinaDepartment of Applied Mathematics, Hong Kong Polytechnic University, Hong Kong, China; Corresponding authors.JC School of Public Health and Primary Care, Chinese University of Hong Kong, Hong Kong, China; Shenzhen Research Institute of Chinese University of Hong Kong, Shenzhen, ChinaBackgrounds: An ongoing outbreak of a novel coronavirus (2019-nCoV) pneumonia hit a major city in China, Wuhan, December 2019 and subsequently reached other provinces/regions of China and other countries. We present estimates of the basic reproduction number, R0, of 2019-nCoV in the early phase of the outbreak. Methods: Accounting for the impact of the variations in disease reporting rate, we modelled the epidemic curve of 2019-nCoV cases time series, in mainland China from January 10 to January 24, 2020, through the exponential growth. With the estimated intrinsic growth rate (γ), we estimated R0 by using the serial intervals (SI) of two other well-known coronavirus diseases, MERS and SARS, as approximations for the true unknown SI. Findings: The early outbreak data largely follows the exponential growth. We estimated that the mean R0 ranges from 2.24 (95%CI: 1.96–2.55) to 3.58 (95%CI: 2.89–4.39) associated with 8-fold to 2-fold increase in the reporting rate. We demonstrated that changes in reporting rate substantially affect estimates of R0. Conclusion: The mean estimate of R0 for the 2019-nCoV ranges from 2.24 to 3.58, and is significantly larger than 1. Our findings indicate the potential of 2019-nCoV to cause outbreaks. Keywords: Basic reproduction number, Novel coronavirus (2019-nCoV)http://www.sciencedirect.com/science/article/pii/S1201971220300539
collection DOAJ
language English
format Article
sources DOAJ
author Shi Zhao
Qianyin Lin
Jinjun Ran
Salihu S. Musa
Guangpu Yang
Weiming Wang
Yijun Lou
Daozhou Gao
Lin Yang
Daihai He
Maggie H. Wang
spellingShingle Shi Zhao
Qianyin Lin
Jinjun Ran
Salihu S. Musa
Guangpu Yang
Weiming Wang
Yijun Lou
Daozhou Gao
Lin Yang
Daihai He
Maggie H. Wang
Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreak
International Journal of Infectious Diseases
author_facet Shi Zhao
Qianyin Lin
Jinjun Ran
Salihu S. Musa
Guangpu Yang
Weiming Wang
Yijun Lou
Daozhou Gao
Lin Yang
Daihai He
Maggie H. Wang
author_sort Shi Zhao
title Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreak
title_short Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreak
title_full Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreak
title_fullStr Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreak
title_full_unstemmed Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreak
title_sort preliminary estimation of the basic reproduction number of novel coronavirus (2019-ncov) in china, from 2019 to 2020: a data-driven analysis in the early phase of the outbreak
publisher Elsevier
series International Journal of Infectious Diseases
issn 1201-9712
publishDate 2020-03-01
description Backgrounds: An ongoing outbreak of a novel coronavirus (2019-nCoV) pneumonia hit a major city in China, Wuhan, December 2019 and subsequently reached other provinces/regions of China and other countries. We present estimates of the basic reproduction number, R0, of 2019-nCoV in the early phase of the outbreak. Methods: Accounting for the impact of the variations in disease reporting rate, we modelled the epidemic curve of 2019-nCoV cases time series, in mainland China from January 10 to January 24, 2020, through the exponential growth. With the estimated intrinsic growth rate (γ), we estimated R0 by using the serial intervals (SI) of two other well-known coronavirus diseases, MERS and SARS, as approximations for the true unknown SI. Findings: The early outbreak data largely follows the exponential growth. We estimated that the mean R0 ranges from 2.24 (95%CI: 1.96–2.55) to 3.58 (95%CI: 2.89–4.39) associated with 8-fold to 2-fold increase in the reporting rate. We demonstrated that changes in reporting rate substantially affect estimates of R0. Conclusion: The mean estimate of R0 for the 2019-nCoV ranges from 2.24 to 3.58, and is significantly larger than 1. Our findings indicate the potential of 2019-nCoV to cause outbreaks. Keywords: Basic reproduction number, Novel coronavirus (2019-nCoV)
url http://www.sciencedirect.com/science/article/pii/S1201971220300539
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