Macrophage gene expression associated with remodeling of the prepartum rat cervix: microarray and pathway analyses.

As the critical gatekeeper for birth, prepartum remodeling of the cervix is associated with increased resident macrophages (Mφ), proinflammatory processes, and extracellular matrix degradation. This study tested the hypothesis that expression of genes unique to Mφs characterizes the prepartum from u...

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Main Authors: Abigail E Dobyns, Ravi Goyal, Lauren Grisham Carpenter, Tom C Freeman, Lawrence D Longo, Steven M Yellon
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2015-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC4374766?pdf=render
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spelling doaj-bd920579cbe14163a8738600205077762020-11-25T01:24:21ZengPublic Library of Science (PLoS)PLoS ONE1932-62032015-01-01103e011978210.1371/journal.pone.0119782Macrophage gene expression associated with remodeling of the prepartum rat cervix: microarray and pathway analyses.Abigail E DobynsRavi GoyalLauren Grisham CarpenterTom C FreemanLawrence D LongoSteven M YellonAs the critical gatekeeper for birth, prepartum remodeling of the cervix is associated with increased resident macrophages (Mφ), proinflammatory processes, and extracellular matrix degradation. This study tested the hypothesis that expression of genes unique to Mφs characterizes the prepartum from unremodeled nonpregnant cervix. Perfused cervix from prepartum day 21 postbreeding (D21) or nonpregnant (NP) rats, with or without Mφs, had RNA extracted and whole genome microarray analysis performed. By subtractive analyses, expression of 194 and 120 genes related to Mφs in the cervix from D21 rats were increased and decreased, respectively. In both D21 and NP groups, 158 and 57 Mφ genes were also more or less up- or down-regulated, respectively. Mφ gene expression patterns were most strongly correlated within groups and in 5 major clustering patterns. In the cervix from D21 rats, functional categories and canonical pathways of increased expression by Mφ gene related to extracellular matrix, cell proliferation, differentiation, as well as cell signaling. Pathways were characteristic of inflammation and wound healing, e.g., CD163, CD206, and CCR2. Signatures of only inflammation pathways, e.g., CSF1R, EMR1, and MMP12 were common to both D21 and NP groups. Thus, a novel and complex balance of Mφ genes and clusters differentiated the degraded extracellular matrix and cellular genomic activities in the cervix before birth from the unremodeled state. Predicted Mφ activities, pathways, and networks raise the possibility that expression patterns of specific genes characterize and promote prepartum remodeling of the cervix for parturition at term and with preterm labor.http://europepmc.org/articles/PMC4374766?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Abigail E Dobyns
Ravi Goyal
Lauren Grisham Carpenter
Tom C Freeman
Lawrence D Longo
Steven M Yellon
spellingShingle Abigail E Dobyns
Ravi Goyal
Lauren Grisham Carpenter
Tom C Freeman
Lawrence D Longo
Steven M Yellon
Macrophage gene expression associated with remodeling of the prepartum rat cervix: microarray and pathway analyses.
PLoS ONE
author_facet Abigail E Dobyns
Ravi Goyal
Lauren Grisham Carpenter
Tom C Freeman
Lawrence D Longo
Steven M Yellon
author_sort Abigail E Dobyns
title Macrophage gene expression associated with remodeling of the prepartum rat cervix: microarray and pathway analyses.
title_short Macrophage gene expression associated with remodeling of the prepartum rat cervix: microarray and pathway analyses.
title_full Macrophage gene expression associated with remodeling of the prepartum rat cervix: microarray and pathway analyses.
title_fullStr Macrophage gene expression associated with remodeling of the prepartum rat cervix: microarray and pathway analyses.
title_full_unstemmed Macrophage gene expression associated with remodeling of the prepartum rat cervix: microarray and pathway analyses.
title_sort macrophage gene expression associated with remodeling of the prepartum rat cervix: microarray and pathway analyses.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2015-01-01
description As the critical gatekeeper for birth, prepartum remodeling of the cervix is associated with increased resident macrophages (Mφ), proinflammatory processes, and extracellular matrix degradation. This study tested the hypothesis that expression of genes unique to Mφs characterizes the prepartum from unremodeled nonpregnant cervix. Perfused cervix from prepartum day 21 postbreeding (D21) or nonpregnant (NP) rats, with or without Mφs, had RNA extracted and whole genome microarray analysis performed. By subtractive analyses, expression of 194 and 120 genes related to Mφs in the cervix from D21 rats were increased and decreased, respectively. In both D21 and NP groups, 158 and 57 Mφ genes were also more or less up- or down-regulated, respectively. Mφ gene expression patterns were most strongly correlated within groups and in 5 major clustering patterns. In the cervix from D21 rats, functional categories and canonical pathways of increased expression by Mφ gene related to extracellular matrix, cell proliferation, differentiation, as well as cell signaling. Pathways were characteristic of inflammation and wound healing, e.g., CD163, CD206, and CCR2. Signatures of only inflammation pathways, e.g., CSF1R, EMR1, and MMP12 were common to both D21 and NP groups. Thus, a novel and complex balance of Mφ genes and clusters differentiated the degraded extracellular matrix and cellular genomic activities in the cervix before birth from the unremodeled state. Predicted Mφ activities, pathways, and networks raise the possibility that expression patterns of specific genes characterize and promote prepartum remodeling of the cervix for parturition at term and with preterm labor.
url http://europepmc.org/articles/PMC4374766?pdf=render
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