Identification of Group B Streptococci Using 16S rRNA, cfb, scpB, and atr Genes in Pregnant Women by PCR

Streptococcus agalactiae is acommensalorganism, but it may cause infection in susceptible hosts. The aim of this study was to evaluate PCR assay compared with conventional culture method for direct detection of Streptococcus agalactiae. Total of 203 paired low vaginal swabs were collected from wome...

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Main Authors: Seyed Masoud Mousavi, Seyed Mostafa Hosseini, Rasoul Yousefi Mashouf, Mohammad Reza Arabestani
Format: Article
Language:English
Published: Tehran University of Medical Sciences 2017-01-01
Series:Acta Medica Iranica
Subjects:
Online Access:https://acta.tums.ac.ir/index.php/acta/article/view/6105
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spelling doaj-bdf1aacc71db48ba851b17af2dc2cad92020-11-25T03:26:02ZengTehran University of Medical SciencesActa Medica Iranica0044-60251735-96942017-01-0154125091Identification of Group B Streptococci Using 16S rRNA, cfb, scpB, and atr Genes in Pregnant Women by PCRSeyed Masoud Mousavi0Seyed Mostafa Hosseini1Rasoul Yousefi Mashouf2Mohammad Reza Arabestani3Department of Microbiology, School of Medicine, Hamadan University of Medical Sciences, Hamadan, Iran.Department of Microbiology, School of Medicine, Hamadan University of Medical Sciences, Hamadan, Iran.Department of Microbiology, School of Medicine, Hamadan University of Medical Sciences, Hamadan, Iran.Department of Microbiology, School of Medicine, Hamadan University of Medical Sciences, Hamadan, Iran. AND Department of Microbiology, Brucellosis Research Center, Hamadan University of Medical Sciences, Hamadan, Iran. Streptococcus agalactiae is acommensalorganism, but it may cause infection in susceptible hosts. The aim of this study was to evaluate PCR assay compared with conventional culture method for direct detection of Streptococcus agalactiae. Total of 203 paired low vaginal swabs were collected from women at 35-37 weeks of pregnancy from June 2013 through February 2014 for detection of Streptococcus agalactiae using PCR assay targeting 16S rRNA, cfb, scpB, and atr genes and culture method following broth enrichment. The results were recorded and evaluated for determining of sensitivity, specificity, positive and negative predictive values of PCR assaycompared with culture method. Prevalence of Streptococcus agalactiae was determined as 7.39% (n=15) using culture method; 19.70% (n=40) by PCR targeting 16S rRNA gene; 18.23% (n=37) by targeting atr gene; 17.24% (n=35) by cfb gene; and 8.87% (n=18) by scpB gene. Generally, a total of 49 specimens were considered true positive (27 samples by PCR assay using the four genes in sum, 4 samples only by atr gene PCR, 3 samples only by cfb gene PCR, 2 samples only by culture method, and 13 samples by PCR assay and culture method in common) and prevalence of Streptococcus agalactiae determined 24.14% in Hamadan. The current data demonstrated that performing only culture method for detecting GBS from pregnant women leads to missed false negative carrier individuals. Thus, it is recommended that both the PCR assay and conventional culture method to be performed in order to detect Streptococcus agalactiae. https://acta.tums.ac.ir/index.php/acta/article/view/6105Streptococcus agalactiaePregnancyPolymerase chain reaction
collection DOAJ
language English
format Article
sources DOAJ
author Seyed Masoud Mousavi
Seyed Mostafa Hosseini
Rasoul Yousefi Mashouf
Mohammad Reza Arabestani
spellingShingle Seyed Masoud Mousavi
Seyed Mostafa Hosseini
Rasoul Yousefi Mashouf
Mohammad Reza Arabestani
Identification of Group B Streptococci Using 16S rRNA, cfb, scpB, and atr Genes in Pregnant Women by PCR
Acta Medica Iranica
Streptococcus agalactiae
Pregnancy
Polymerase chain reaction
author_facet Seyed Masoud Mousavi
Seyed Mostafa Hosseini
Rasoul Yousefi Mashouf
Mohammad Reza Arabestani
author_sort Seyed Masoud Mousavi
title Identification of Group B Streptococci Using 16S rRNA, cfb, scpB, and atr Genes in Pregnant Women by PCR
title_short Identification of Group B Streptococci Using 16S rRNA, cfb, scpB, and atr Genes in Pregnant Women by PCR
title_full Identification of Group B Streptococci Using 16S rRNA, cfb, scpB, and atr Genes in Pregnant Women by PCR
title_fullStr Identification of Group B Streptococci Using 16S rRNA, cfb, scpB, and atr Genes in Pregnant Women by PCR
title_full_unstemmed Identification of Group B Streptococci Using 16S rRNA, cfb, scpB, and atr Genes in Pregnant Women by PCR
title_sort identification of group b streptococci using 16s rrna, cfb, scpb, and atr genes in pregnant women by pcr
publisher Tehran University of Medical Sciences
series Acta Medica Iranica
issn 0044-6025
1735-9694
publishDate 2017-01-01
description Streptococcus agalactiae is acommensalorganism, but it may cause infection in susceptible hosts. The aim of this study was to evaluate PCR assay compared with conventional culture method for direct detection of Streptococcus agalactiae. Total of 203 paired low vaginal swabs were collected from women at 35-37 weeks of pregnancy from June 2013 through February 2014 for detection of Streptococcus agalactiae using PCR assay targeting 16S rRNA, cfb, scpB, and atr genes and culture method following broth enrichment. The results were recorded and evaluated for determining of sensitivity, specificity, positive and negative predictive values of PCR assaycompared with culture method. Prevalence of Streptococcus agalactiae was determined as 7.39% (n=15) using culture method; 19.70% (n=40) by PCR targeting 16S rRNA gene; 18.23% (n=37) by targeting atr gene; 17.24% (n=35) by cfb gene; and 8.87% (n=18) by scpB gene. Generally, a total of 49 specimens were considered true positive (27 samples by PCR assay using the four genes in sum, 4 samples only by atr gene PCR, 3 samples only by cfb gene PCR, 2 samples only by culture method, and 13 samples by PCR assay and culture method in common) and prevalence of Streptococcus agalactiae determined 24.14% in Hamadan. The current data demonstrated that performing only culture method for detecting GBS from pregnant women leads to missed false negative carrier individuals. Thus, it is recommended that both the PCR assay and conventional culture method to be performed in order to detect Streptococcus agalactiae.
topic Streptococcus agalactiae
Pregnancy
Polymerase chain reaction
url https://acta.tums.ac.ir/index.php/acta/article/view/6105
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