Comparing imaging, acoustics, and radar to monitor Leach’s storm-petrel colonies

Seabirds are integral components of marine ecosystems and, with many populations globally threatened, there is a critical need for effective and scalable seabird monitoring strategies. Many seabird species nest in burrows, which can make traditional monitoring methods costly, infeasible, or damaging...

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Main Authors: Rachael A. Orben, Abram B. Fleishman, Abraham L. Borker, William Bridgeland, Amanda J. Gladics, Jessica Porquez, Peter Sanzenbacher, Shawn W. Stephensen, Roberta Swift, Matthew W. McKown, Robert M. Suryan
Format: Article
Language:English
Published: PeerJ Inc. 2019-04-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/6721.pdf
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spelling doaj-bee619216342446090807ae82a17418a2020-11-25T01:26:54ZengPeerJ Inc.PeerJ2167-83592019-04-017e672110.7717/peerj.6721Comparing imaging, acoustics, and radar to monitor Leach’s storm-petrel coloniesRachael A. Orben0Abram B. Fleishman1Abraham L. Borker2William Bridgeland3Amanda J. Gladics4Jessica Porquez5Peter Sanzenbacher6Shawn W. Stephensen7Roberta Swift8Matthew W. McKown9Robert M. Suryan10Department of Fisheries and Wildlife, Hatfield Marine Science Center, Oregon State University, Newport, OR, United States of AmericaConservation Metrics, Inc., Santa Cruz, CA, United States of AmericaDepartment of Ecology and Evolutionary Biology, University of California, Santa Cruz, CA, United States of AmericaOregon Coast National Wildlife Refuge Complex, U.S. Fish and Wildlife Service, Newport, OR, United States of AmericaDepartment of Fisheries and Wildlife, Hatfield Marine Science Center, Oregon State University, Newport, OR, United States of AmericaDepartment of Fisheries and Wildlife, Hatfield Marine Science Center, Oregon State University, Newport, OR, United States of AmericaABR, Inc.—Environmental Research & Services, Fairbanks, AK, United States of AmericaOregon Coast National Wildlife Refuge Complex, U.S. Fish and Wildlife Service, Newport, OR, United States of AmericaRegion 1—Migratory Birds and Habitat Program, U.S. Fish and Wildlife Service, Portland, OR, United States of AmericaConservation Metrics, Inc., Santa Cruz, CA, United States of AmericaDepartment of Fisheries and Wildlife, Hatfield Marine Science Center, Oregon State University, Newport, OR, United States of AmericaSeabirds are integral components of marine ecosystems and, with many populations globally threatened, there is a critical need for effective and scalable seabird monitoring strategies. Many seabird species nest in burrows, which can make traditional monitoring methods costly, infeasible, or damaging to nesting habitats. Traditional burrow occupancy surveys, where possible, can occur infrequently and therefore lead to an incomplete understanding of population trends. For example, in Oregon, during the last three decades there have been large changes in the abundance of Leach’s storm-petrels (Hydrobates leucorhoa), which included drastic declines at some colonies. Unfortunately, traditional monitoring failed to capture the timing and magnitude of change, limiting managers’ ability to determine causes of the decline and curtailing management options. New, easily repeatable methods of quantifying relative abundance are needed. For this study, we tested three methods of remote monitoring: passive acoustic monitoring, time-lapse cameras, and radar. Abundance indices derived from acoustics and imagery: call rates, acoustic energy, and counts were significantly related to traditional estimates of burrow occupancy of Leach’s storm-petrels. Due to sampling limitations, we were unable to compare radar to burrow occupancy. Image counts were significantly correlated with all other indices, including radar, while indices derived from acoustics and radar were not correlated. Acoustic data likely reflect different aspects of the population and hold the potential for the further development of indices to disentangle phenology, attendance of breeding birds, and reproductive success. We found that image counts are comparable with standard methods (e.g., radar) in producing annual abundance indices. We recommend that managers consider a sampling scheme that incorporates both acoustics and imaging, but for sites inaccessible to humans, radar remains the sole option. Implementation of acoustic and camera based monitoring programs will provide much needed information for a vulnerable group of seabirds.https://peerj.com/articles/6721.pdfAeroecologyBurrow-nestingDeep-neural networksPassive acoustic monitoringRadar ornithologyPopulation monitoring
collection DOAJ
language English
format Article
sources DOAJ
author Rachael A. Orben
Abram B. Fleishman
Abraham L. Borker
William Bridgeland
Amanda J. Gladics
Jessica Porquez
Peter Sanzenbacher
Shawn W. Stephensen
Roberta Swift
Matthew W. McKown
Robert M. Suryan
spellingShingle Rachael A. Orben
Abram B. Fleishman
Abraham L. Borker
William Bridgeland
Amanda J. Gladics
Jessica Porquez
Peter Sanzenbacher
Shawn W. Stephensen
Roberta Swift
Matthew W. McKown
Robert M. Suryan
Comparing imaging, acoustics, and radar to monitor Leach’s storm-petrel colonies
PeerJ
Aeroecology
Burrow-nesting
Deep-neural networks
Passive acoustic monitoring
Radar ornithology
Population monitoring
author_facet Rachael A. Orben
Abram B. Fleishman
Abraham L. Borker
William Bridgeland
Amanda J. Gladics
Jessica Porquez
Peter Sanzenbacher
Shawn W. Stephensen
Roberta Swift
Matthew W. McKown
Robert M. Suryan
author_sort Rachael A. Orben
title Comparing imaging, acoustics, and radar to monitor Leach’s storm-petrel colonies
title_short Comparing imaging, acoustics, and radar to monitor Leach’s storm-petrel colonies
title_full Comparing imaging, acoustics, and radar to monitor Leach’s storm-petrel colonies
title_fullStr Comparing imaging, acoustics, and radar to monitor Leach’s storm-petrel colonies
title_full_unstemmed Comparing imaging, acoustics, and radar to monitor Leach’s storm-petrel colonies
title_sort comparing imaging, acoustics, and radar to monitor leach’s storm-petrel colonies
publisher PeerJ Inc.
series PeerJ
issn 2167-8359
publishDate 2019-04-01
description Seabirds are integral components of marine ecosystems and, with many populations globally threatened, there is a critical need for effective and scalable seabird monitoring strategies. Many seabird species nest in burrows, which can make traditional monitoring methods costly, infeasible, or damaging to nesting habitats. Traditional burrow occupancy surveys, where possible, can occur infrequently and therefore lead to an incomplete understanding of population trends. For example, in Oregon, during the last three decades there have been large changes in the abundance of Leach’s storm-petrels (Hydrobates leucorhoa), which included drastic declines at some colonies. Unfortunately, traditional monitoring failed to capture the timing and magnitude of change, limiting managers’ ability to determine causes of the decline and curtailing management options. New, easily repeatable methods of quantifying relative abundance are needed. For this study, we tested three methods of remote monitoring: passive acoustic monitoring, time-lapse cameras, and radar. Abundance indices derived from acoustics and imagery: call rates, acoustic energy, and counts were significantly related to traditional estimates of burrow occupancy of Leach’s storm-petrels. Due to sampling limitations, we were unable to compare radar to burrow occupancy. Image counts were significantly correlated with all other indices, including radar, while indices derived from acoustics and radar were not correlated. Acoustic data likely reflect different aspects of the population and hold the potential for the further development of indices to disentangle phenology, attendance of breeding birds, and reproductive success. We found that image counts are comparable with standard methods (e.g., radar) in producing annual abundance indices. We recommend that managers consider a sampling scheme that incorporates both acoustics and imaging, but for sites inaccessible to humans, radar remains the sole option. Implementation of acoustic and camera based monitoring programs will provide much needed information for a vulnerable group of seabirds.
topic Aeroecology
Burrow-nesting
Deep-neural networks
Passive acoustic monitoring
Radar ornithology
Population monitoring
url https://peerj.com/articles/6721.pdf
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