Novel South African Rare Actinomycete <i>Kribbella</i> <i>speibonae</i> Strain SK5: A Prolific Producer of Hydroxamate Siderophores Including New Dehydroxylated Congeners

In this paper, we report on the chemistry of the rare South African Actinomycete <i>Kribbella speibonae</i> strain SK5, a prolific producer of hydroxamate siderophores and their congeners. Two new analogues, dehydroxylated desferrioxamines, speibonoxamine <b>1</b> and desoxy-...

Full description

Bibliographic Details
Main Authors: Kojo Sekyi Acquah, Denzil R. Beukes, Digby F. Warner, Paul R. Meyers, Suthananda N. Sunassee, Fleurdeliz Maglangit, Hai Deng, Marcel Jaspars, David W. Gammon
Format: Article
Language:English
Published: MDPI AG 2020-06-01
Series:Molecules
Subjects:
Online Access:https://www.mdpi.com/1420-3049/25/13/2979
Description
Summary:In this paper, we report on the chemistry of the rare South African Actinomycete <i>Kribbella speibonae</i> strain SK5, a prolific producer of hydroxamate siderophores and their congeners. Two new analogues, dehydroxylated desferrioxamines, speibonoxamine <b>1</b> and desoxy-desferrioxamine D<sub>1 </sub><b>2</b>, have been isolated, together with four known hydroxamates, desferrioxamine D<sub>1</sub> <b>3</b>, desferrioxamine B <b>4</b>, desoxy-nocardamine <b>5</b> and nocardamine <b>6</b>, and a diketopiperazine (DKP) <b>7</b>. The structures of <b>1</b>–<b>7</b> were characterized by the analysis of HRESIMS and 1D and 2D NMR data, as well as by comparison with the relevant literature. Three new dehydroxy desferrioxamine derivatives <b>8</b>–<b>10</b> were tentatively identified in the molecular network of <i>K.</i> <i>speibonae </i>strain SK5 extracts, and structures were proposed based on their MS/MS fragmentation patterns. A plausible <i>spb</i> biosynthetic pathway was proposed. To the best of our knowledge, this is the first report of the isolation of desferrioxamines from the actinobacterial genus <i>Kribbella</i>.
ISSN:1420-3049