An Environmental Niche Model to Estimate the Potential Presence of Venezuelan Equine Encephalitis Virus in Costa Rica

Venezuelan equine encephalitis virus (VEEV) is an arbovirus transmitted by arthropods, widely distributed in the Americas that, depending on the subtype, can produce outbreaks or yearly cases of encephalitis in horses and humans. The symptoms are similar to those caused by dengue virus and in the wo...

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Main Authors: Bernal León, Carlos Jiménez-Sánchez, Mónica Retamosa-Izaguirre
Format: Article
Language:English
Published: MDPI AG 2021-12-01
Series:International Journal of Environmental Research and Public Health
Subjects:
Online Access:https://www.mdpi.com/1660-4601/18/1/227
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spelling doaj-c2a17155787a4e8780c54d7f49d782432020-12-31T00:03:01ZengMDPI AGInternational Journal of Environmental Research and Public Health1661-78271660-46012021-12-011822722710.3390/ijerph18010227An Environmental Niche Model to Estimate the Potential Presence of Venezuelan Equine Encephalitis Virus in Costa RicaBernal León0Carlos Jiménez-Sánchez1Mónica Retamosa-Izaguirre2Biosecurity Laboratory, Veterinary Service National Laboratory, Animal Health National Service, Ministry of Agriculture and Cattle, Heredia 40104, Costa RicaLaboratory of Virology, Tropical Diseases Research Program (PIET), School of Veterinary Medicine, National University, Heredia 40101, Costa RicaInternational Institute for Wildlife Conservation and Management, National University of Costa Rica, Heredia 40101, Costa RicaVenezuelan equine encephalitis virus (VEEV) is an arbovirus transmitted by arthropods, widely distributed in the Americas that, depending on the subtype, can produce outbreaks or yearly cases of encephalitis in horses and humans. The symptoms are similar to those caused by dengue virus and in the worst-case scenario, involve encephalitis, and death. MaxEnt is software that uses climatological, geographical, and occurrence data of a particular species to create a model to estimate possible niches that could have these favorable conditions. We used MaxEnt with a total of 188 registers of VEEV presence, and 20 variables, (19 bioclimatological plus altitude) to determine the niches promising for the presence of VEEV. The area under the ROC curve (AUC) value for the model with all variables was 0.80 for the training data and 0.72 for the test. The variables with the highest contribution to the model were Bio11 (mean temperature of the coldest quarter) 32.5%, Bio17 (precipitation of the driest quarter) 16.9%, Bio2 (annual mean temperature) 15.1%, altitude (m.a.s.l) 6.6%, and Bio18 (precipitation of the warmest quarter) 6.2%. The product of this research will be useful under the one health scheme to animal and human health authorities to forecast areas with high propensity for VEEV cases in the future.https://www.mdpi.com/1660-4601/18/1/227VEEVpredicted mapMaxEntCosta Ricaarboviruszoonotic
collection DOAJ
language English
format Article
sources DOAJ
author Bernal León
Carlos Jiménez-Sánchez
Mónica Retamosa-Izaguirre
spellingShingle Bernal León
Carlos Jiménez-Sánchez
Mónica Retamosa-Izaguirre
An Environmental Niche Model to Estimate the Potential Presence of Venezuelan Equine Encephalitis Virus in Costa Rica
International Journal of Environmental Research and Public Health
VEEV
predicted map
MaxEnt
Costa Rica
arbovirus
zoonotic
author_facet Bernal León
Carlos Jiménez-Sánchez
Mónica Retamosa-Izaguirre
author_sort Bernal León
title An Environmental Niche Model to Estimate the Potential Presence of Venezuelan Equine Encephalitis Virus in Costa Rica
title_short An Environmental Niche Model to Estimate the Potential Presence of Venezuelan Equine Encephalitis Virus in Costa Rica
title_full An Environmental Niche Model to Estimate the Potential Presence of Venezuelan Equine Encephalitis Virus in Costa Rica
title_fullStr An Environmental Niche Model to Estimate the Potential Presence of Venezuelan Equine Encephalitis Virus in Costa Rica
title_full_unstemmed An Environmental Niche Model to Estimate the Potential Presence of Venezuelan Equine Encephalitis Virus in Costa Rica
title_sort environmental niche model to estimate the potential presence of venezuelan equine encephalitis virus in costa rica
publisher MDPI AG
series International Journal of Environmental Research and Public Health
issn 1661-7827
1660-4601
publishDate 2021-12-01
description Venezuelan equine encephalitis virus (VEEV) is an arbovirus transmitted by arthropods, widely distributed in the Americas that, depending on the subtype, can produce outbreaks or yearly cases of encephalitis in horses and humans. The symptoms are similar to those caused by dengue virus and in the worst-case scenario, involve encephalitis, and death. MaxEnt is software that uses climatological, geographical, and occurrence data of a particular species to create a model to estimate possible niches that could have these favorable conditions. We used MaxEnt with a total of 188 registers of VEEV presence, and 20 variables, (19 bioclimatological plus altitude) to determine the niches promising for the presence of VEEV. The area under the ROC curve (AUC) value for the model with all variables was 0.80 for the training data and 0.72 for the test. The variables with the highest contribution to the model were Bio11 (mean temperature of the coldest quarter) 32.5%, Bio17 (precipitation of the driest quarter) 16.9%, Bio2 (annual mean temperature) 15.1%, altitude (m.a.s.l) 6.6%, and Bio18 (precipitation of the warmest quarter) 6.2%. The product of this research will be useful under the one health scheme to animal and human health authorities to forecast areas with high propensity for VEEV cases in the future.
topic VEEV
predicted map
MaxEnt
Costa Rica
arbovirus
zoonotic
url https://www.mdpi.com/1660-4601/18/1/227
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