Data on the phylogenetic typing, integron gene cassette array analysis, multi-drug resistance analysis and correlation between antimicrobial resistance determinants in Klebsiella strains

Data on the phylogenetic typing, integron gene cassette array analysis, multi-drug resistance analysis and correlation between antimicrobial resistance determinants in Klebsiella strains

The antimicrobial resistance of Klebsiella species in the poultry industry is becoming a public concern. In support our recent publication “Characterization of antimicrobial resistance in Klebsiella species isolated from chicken broilers” (Wu et al., 2016) [1], multilocus sequence typing (MLST) and...

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Main Authors: Hao Wu, Mingyu Wang, Yuqing Liu, Xinhua Wang, Yunkun Wang, Jinxing Lu, Hai Xu
Format: Article
Language:English
Published: Elsevier 2016-09-01
Series:Data in Brief
Online Access:http://www.sciencedirect.com/science/article/pii/S2352340916304516
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spelling doaj-c4245c6c84c643ce915bcb105d7d05c12020-11-25T01:14:10ZengElsevierData in Brief2352-34092016-09-01812891294Data on the phylogenetic typing, integron gene cassette array analysis, multi-drug resistance analysis and correlation between antimicrobial resistance determinants in Klebsiella strainsHao Wu0Mingyu Wang1Yuqing Liu2Xinhua Wang3Yunkun Wang4Jinxing Lu5Hai Xu6State Key Laboratory of Microbial Technology, School of Life Sciences, Shandong University, Jinan 250100, Shandong, PR ChinaState Key Laboratory of Microbial Technology, School of Life Sciences, Shandong University, Jinan 250100, Shandong, PR ChinaShandong Key Laboratory of Animal Disease Control and Breeding, Institute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, Jinan 250100, Shandong, PR ChinaSchool of Environmental Science and Engineering, Shandong University, Jinan 250100, Shandong, PR ChinaSchool of Environmental Science and Engineering, Shandong University, Jinan 250100, Shandong, PR ChinaState Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR ChinaState Key Laboratory of Microbial Technology, School of Life Sciences, Shandong University, Jinan 250100, Shandong, PR China; Corresponding author.The antimicrobial resistance of Klebsiella species in the poultry industry is becoming a public concern. In support our recent publication “Characterization of antimicrobial resistance in Klebsiella species isolated from chicken broilers” (Wu et al., 2016) [1], multilocus sequence typing (MLST) and gyrA PCR-RFLP assays were conducted to identify the genetic relationships between and phylogenetic groups of the 90 antimicrobial resistant Klebsiella species isolated from a commercial broiler slaughter plant in Shandong, China. In addition, PCR-RFLP was performed to identify different gene cassette arrays in class 1 and 2 integrons, and the correlations between different antimicrobial resistance determinants were analyzed. Keywords: Antimicrobial resistant Klebsiella species, Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP), Gene cassette arrays of integron, Statistical analysishttp://www.sciencedirect.com/science/article/pii/S2352340916304516
collection DOAJ
language English
format Article
sources DOAJ
author Hao Wu
Mingyu Wang
Yuqing Liu
Xinhua Wang
Yunkun Wang
Jinxing Lu
Hai Xu
spellingShingle Hao Wu
Mingyu Wang
Yuqing Liu
Xinhua Wang
Yunkun Wang
Jinxing Lu
Hai Xu
Data on the phylogenetic typing, integron gene cassette array analysis, multi-drug resistance analysis and correlation between antimicrobial resistance determinants in Klebsiella strains
Data in Brief
author_facet Hao Wu
Mingyu Wang
Yuqing Liu
Xinhua Wang
Yunkun Wang
Jinxing Lu
Hai Xu
author_sort Hao Wu
title Data on the phylogenetic typing, integron gene cassette array analysis, multi-drug resistance analysis and correlation between antimicrobial resistance determinants in Klebsiella strains
title_short Data on the phylogenetic typing, integron gene cassette array analysis, multi-drug resistance analysis and correlation between antimicrobial resistance determinants in Klebsiella strains
title_full Data on the phylogenetic typing, integron gene cassette array analysis, multi-drug resistance analysis and correlation between antimicrobial resistance determinants in Klebsiella strains
title_fullStr Data on the phylogenetic typing, integron gene cassette array analysis, multi-drug resistance analysis and correlation between antimicrobial resistance determinants in Klebsiella strains
title_full_unstemmed Data on the phylogenetic typing, integron gene cassette array analysis, multi-drug resistance analysis and correlation between antimicrobial resistance determinants in Klebsiella strains
title_sort data on the phylogenetic typing, integron gene cassette array analysis, multi-drug resistance analysis and correlation between antimicrobial resistance determinants in klebsiella strains
publisher Elsevier
series Data in Brief
issn 2352-3409
publishDate 2016-09-01
description The antimicrobial resistance of Klebsiella species in the poultry industry is becoming a public concern. In support our recent publication “Characterization of antimicrobial resistance in Klebsiella species isolated from chicken broilers” (Wu et al., 2016) [1], multilocus sequence typing (MLST) and gyrA PCR-RFLP assays were conducted to identify the genetic relationships between and phylogenetic groups of the 90 antimicrobial resistant Klebsiella species isolated from a commercial broiler slaughter plant in Shandong, China. In addition, PCR-RFLP was performed to identify different gene cassette arrays in class 1 and 2 integrons, and the correlations between different antimicrobial resistance determinants were analyzed. Keywords: Antimicrobial resistant Klebsiella species, Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP), Gene cassette arrays of integron, Statistical analysis
url http://www.sciencedirect.com/science/article/pii/S2352340916304516
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