Deep Learning Could Diagnose Diabetic Nephropathy with Renal Pathological Immunofluorescent Images

Artificial Intelligence (AI) imaging diagnosis is developing, making enormous steps forward in medical fields. Regarding diabetic nephropathy (DN), medical doctors diagnose them with clinical course, clinical laboratory data and renal pathology, mainly evaluate with light microscopy images rather th...

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Main Authors: Shinji Kitamura, Kensaku Takahashi, Yizhen Sang, Kazuhiko Fukushima, Kenji Tsuji, Jun Wada
Format: Article
Language:English
Published: MDPI AG 2020-07-01
Series:Diagnostics
Subjects:
Online Access:https://www.mdpi.com/2075-4418/10/7/466
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spelling doaj-c44913d33be045ccb4171310f51382b82020-11-25T03:38:46ZengMDPI AGDiagnostics2075-44182020-07-011046646610.3390/diagnostics10070466Deep Learning Could Diagnose Diabetic Nephropathy with Renal Pathological Immunofluorescent ImagesShinji Kitamura0Kensaku Takahashi1Yizhen Sang2Kazuhiko Fukushima3Kenji Tsuji4Jun Wada5Department of Nephrology, Rheumatology, Endocrinology and Metabolism, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, 2-5-1 Shikata-cho, Okayama-shi, Okayama 700-8558, JapanDepartment of Nephrology, Rheumatology, Endocrinology and Metabolism, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, 2-5-1 Shikata-cho, Okayama-shi, Okayama 700-8558, JapanDepartment of Nephrology, Rheumatology, Endocrinology and Metabolism, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, 2-5-1 Shikata-cho, Okayama-shi, Okayama 700-8558, JapanDepartment of Nephrology, Rheumatology, Endocrinology and Metabolism, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, 2-5-1 Shikata-cho, Okayama-shi, Okayama 700-8558, JapanDepartment of Nephrology, Rheumatology, Endocrinology and Metabolism, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, 2-5-1 Shikata-cho, Okayama-shi, Okayama 700-8558, JapanDepartment of Nephrology, Rheumatology, Endocrinology and Metabolism, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, 2-5-1 Shikata-cho, Okayama-shi, Okayama 700-8558, JapanArtificial Intelligence (AI) imaging diagnosis is developing, making enormous steps forward in medical fields. Regarding diabetic nephropathy (DN), medical doctors diagnose them with clinical course, clinical laboratory data and renal pathology, mainly evaluate with light microscopy images rather than immunofluorescent images because there are no characteristic findings in immunofluorescent images for DN diagnosis. Here, we examined the possibility of whether AI could diagnose DN from immunofluorescent images. We collected renal immunofluorescent images from 885 renal biopsy patients in our hospital, and we created a dataset that contains six types of immunofluorescent images of IgG, IgA, IgM, C3, C1q and Fibrinogen for each patient. Using the dataset, 39 programs worked without errors (Area under the curve (AUC): 0.93). Five programs diagnosed DN completely with immunofluorescent images (AUC: 1.00). By analyzing with Local interpretable model-agnostic explanations (Lime), the AI focused on the peripheral lesion of DN glomeruli. On the other hand, the nephrologist diagnostic ratio (AUC: 0.75833) was slightly inferior to AI diagnosis. These findings suggest that DN could be diagnosed only by immunofluorescent images by deep learning. AI could diagnose DN and identify classified unknown parts with the immunofluorescent images that nephrologists usually do not use for DN diagnosis.https://www.mdpi.com/2075-4418/10/7/466immunofluorescent imagerenal pathologyartificial intelligencedeep learningdiabetic nephropathy
collection DOAJ
language English
format Article
sources DOAJ
author Shinji Kitamura
Kensaku Takahashi
Yizhen Sang
Kazuhiko Fukushima
Kenji Tsuji
Jun Wada
spellingShingle Shinji Kitamura
Kensaku Takahashi
Yizhen Sang
Kazuhiko Fukushima
Kenji Tsuji
Jun Wada
Deep Learning Could Diagnose Diabetic Nephropathy with Renal Pathological Immunofluorescent Images
Diagnostics
immunofluorescent image
renal pathology
artificial intelligence
deep learning
diabetic nephropathy
author_facet Shinji Kitamura
Kensaku Takahashi
Yizhen Sang
Kazuhiko Fukushima
Kenji Tsuji
Jun Wada
author_sort Shinji Kitamura
title Deep Learning Could Diagnose Diabetic Nephropathy with Renal Pathological Immunofluorescent Images
title_short Deep Learning Could Diagnose Diabetic Nephropathy with Renal Pathological Immunofluorescent Images
title_full Deep Learning Could Diagnose Diabetic Nephropathy with Renal Pathological Immunofluorescent Images
title_fullStr Deep Learning Could Diagnose Diabetic Nephropathy with Renal Pathological Immunofluorescent Images
title_full_unstemmed Deep Learning Could Diagnose Diabetic Nephropathy with Renal Pathological Immunofluorescent Images
title_sort deep learning could diagnose diabetic nephropathy with renal pathological immunofluorescent images
publisher MDPI AG
series Diagnostics
issn 2075-4418
publishDate 2020-07-01
description Artificial Intelligence (AI) imaging diagnosis is developing, making enormous steps forward in medical fields. Regarding diabetic nephropathy (DN), medical doctors diagnose them with clinical course, clinical laboratory data and renal pathology, mainly evaluate with light microscopy images rather than immunofluorescent images because there are no characteristic findings in immunofluorescent images for DN diagnosis. Here, we examined the possibility of whether AI could diagnose DN from immunofluorescent images. We collected renal immunofluorescent images from 885 renal biopsy patients in our hospital, and we created a dataset that contains six types of immunofluorescent images of IgG, IgA, IgM, C3, C1q and Fibrinogen for each patient. Using the dataset, 39 programs worked without errors (Area under the curve (AUC): 0.93). Five programs diagnosed DN completely with immunofluorescent images (AUC: 1.00). By analyzing with Local interpretable model-agnostic explanations (Lime), the AI focused on the peripheral lesion of DN glomeruli. On the other hand, the nephrologist diagnostic ratio (AUC: 0.75833) was slightly inferior to AI diagnosis. These findings suggest that DN could be diagnosed only by immunofluorescent images by deep learning. AI could diagnose DN and identify classified unknown parts with the immunofluorescent images that nephrologists usually do not use for DN diagnosis.
topic immunofluorescent image
renal pathology
artificial intelligence
deep learning
diabetic nephropathy
url https://www.mdpi.com/2075-4418/10/7/466
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AT kazuhikofukushima deeplearningcoulddiagnosediabeticnephropathywithrenalpathologicalimmunofluorescentimages
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