Real-time estimation of electric fields induced by transcranial magnetic stimulation with deep neural networks

Background: Transcranial magnetic stimulation (TMS) plays an important role in treatment of mental and neurological illnesses, and neurosurgery. However, it is difficult to target specific brain regions accurately because the complex anatomy of the brain substantially affects the shape and strength...

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Main Authors: Tatsuya Yokota, Toyohiro Maki, Tatsuya Nagata, Takenobu Murakami, Yoshikazu Ugawa, Ilkka Laakso, Akimasa Hirata, Hidekata Hontani
Format: Article
Language:English
Published: Elsevier 2019-11-01
Series:Brain Stimulation
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S1935861X19302669
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spelling doaj-c5a5eefe2dff4c8b8695dd6c05ae2a8a2021-03-19T07:20:30ZengElsevierBrain Stimulation1935-861X2019-11-0112615001507Real-time estimation of electric fields induced by transcranial magnetic stimulation with deep neural networksTatsuya Yokota0Toyohiro Maki1Tatsuya Nagata2Takenobu Murakami3Yoshikazu Ugawa4Ilkka Laakso5Akimasa Hirata6Hidekata Hontani7Department of Computer Science, Nagoya Institute of Technology, Aichi, Japan; Center of Biomedical Physics and Information Technology, Nagoya Institute of Technology, Aichi, Japan; Corresponding author. Department of Computer Science, Nagoya Institute of Technology, Aichi, Japan.Department of Computer Science, Nagoya Institute of Technology, Aichi, JapanDepartment of Computer Science, Nagoya Institute of Technology, Aichi, JapanDepartment of Neurology, Fukushima Medical University, Fukushima, JapanDepartment of Neuro-Regeneration, Fukushima Medical University, Fukushima, JapanDepartment of Electrical Engineering and Automation, Aalto University, Espoo, FinlandDepartment of Electrical and Mechanical Engineering, Nagoya Institute of Technology, Aichi, Japan; Center of Biomedical Physics and Information Technology, Nagoya Institute of Technology, Aichi, JapanDepartment of Computer Science, Nagoya Institute of Technology, Aichi, Japan; Center of Biomedical Physics and Information Technology, Nagoya Institute of Technology, Aichi, JapanBackground: Transcranial magnetic stimulation (TMS) plays an important role in treatment of mental and neurological illnesses, and neurosurgery. However, it is difficult to target specific brain regions accurately because the complex anatomy of the brain substantially affects the shape and strength of the electric fields induced by the TMS coil. A volume conductor model can be used for determining the accurate electric fields; however, the construction of subject-specific anatomical head structures is time-consuming. Objective: The aim of this study is to propose a method to estimate electric fields induced by TMS from only T1 magnetic resonance (MR) images, without constructing a subject-specific anatomical model. Methods: Very large sets of electric fields in the brain of subject-specific anatomical models, which are constructed from T1 and T2 MR images, are computed by a volume conductor model. The relation between electric field distribution and T1 MR images is used for machine learning. Deep neural network (DNN) models are applied for the first time to electric field estimation. Results: By determining the relationships between the T1 MR images and electric fields by DNN models, the process of electric field estimation is markedly accelerated (to 0.03 s) due to the absence of a requirement for anatomical head structure reconstruction and volume conductor computation. Validation shows promising estimation accuracy, and rapid computations of the DNN model are apt for practical applications. Conclusion: The study showed that the DNN model can estimate the electric fields from only T1 MR images and requires low computation time, suggesting the possibility of using machine learning for real-time electric field estimation in navigated TMS.http://www.sciencedirect.com/science/article/pii/S1935861X19302669Deep neural networksTranscranial magnetic stimulationMagnetic resonance imageElectric field estimationVolume conductor modeling
collection DOAJ
language English
format Article
sources DOAJ
author Tatsuya Yokota
Toyohiro Maki
Tatsuya Nagata
Takenobu Murakami
Yoshikazu Ugawa
Ilkka Laakso
Akimasa Hirata
Hidekata Hontani
spellingShingle Tatsuya Yokota
Toyohiro Maki
Tatsuya Nagata
Takenobu Murakami
Yoshikazu Ugawa
Ilkka Laakso
Akimasa Hirata
Hidekata Hontani
Real-time estimation of electric fields induced by transcranial magnetic stimulation with deep neural networks
Brain Stimulation
Deep neural networks
Transcranial magnetic stimulation
Magnetic resonance image
Electric field estimation
Volume conductor modeling
author_facet Tatsuya Yokota
Toyohiro Maki
Tatsuya Nagata
Takenobu Murakami
Yoshikazu Ugawa
Ilkka Laakso
Akimasa Hirata
Hidekata Hontani
author_sort Tatsuya Yokota
title Real-time estimation of electric fields induced by transcranial magnetic stimulation with deep neural networks
title_short Real-time estimation of electric fields induced by transcranial magnetic stimulation with deep neural networks
title_full Real-time estimation of electric fields induced by transcranial magnetic stimulation with deep neural networks
title_fullStr Real-time estimation of electric fields induced by transcranial magnetic stimulation with deep neural networks
title_full_unstemmed Real-time estimation of electric fields induced by transcranial magnetic stimulation with deep neural networks
title_sort real-time estimation of electric fields induced by transcranial magnetic stimulation with deep neural networks
publisher Elsevier
series Brain Stimulation
issn 1935-861X
publishDate 2019-11-01
description Background: Transcranial magnetic stimulation (TMS) plays an important role in treatment of mental and neurological illnesses, and neurosurgery. However, it is difficult to target specific brain regions accurately because the complex anatomy of the brain substantially affects the shape and strength of the electric fields induced by the TMS coil. A volume conductor model can be used for determining the accurate electric fields; however, the construction of subject-specific anatomical head structures is time-consuming. Objective: The aim of this study is to propose a method to estimate electric fields induced by TMS from only T1 magnetic resonance (MR) images, without constructing a subject-specific anatomical model. Methods: Very large sets of electric fields in the brain of subject-specific anatomical models, which are constructed from T1 and T2 MR images, are computed by a volume conductor model. The relation between electric field distribution and T1 MR images is used for machine learning. Deep neural network (DNN) models are applied for the first time to electric field estimation. Results: By determining the relationships between the T1 MR images and electric fields by DNN models, the process of electric field estimation is markedly accelerated (to 0.03 s) due to the absence of a requirement for anatomical head structure reconstruction and volume conductor computation. Validation shows promising estimation accuracy, and rapid computations of the DNN model are apt for practical applications. Conclusion: The study showed that the DNN model can estimate the electric fields from only T1 MR images and requires low computation time, suggesting the possibility of using machine learning for real-time electric field estimation in navigated TMS.
topic Deep neural networks
Transcranial magnetic stimulation
Magnetic resonance image
Electric field estimation
Volume conductor modeling
url http://www.sciencedirect.com/science/article/pii/S1935861X19302669
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