Automated quantification of baseline imaging PET metrics on FDG PET/CT images of pediatric Hodgkin lymphoma patients

Abstract Purpose For pediatric lymphoma, quantitative FDG PET/CT imaging features such as metabolic tumor volume (MTV) are important for prognosis and risk stratification strategies. However, feature extraction is difficult and time-consuming in cases of high disease burden. The purpose of this stud...

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Main Authors: Amy J. Weisman, Jihyun Kim, Inki Lee, Kathleen M. McCarten, Sandy Kessel, Cindy L. Schwartz, Kara M. Kelly, Robert Jeraj, Steve Y. Cho, Tyler J. Bradshaw
Format: Article
Language:English
Published: SpringerOpen 2020-12-01
Series:EJNMMI Physics
Subjects:
PET
Online Access:https://doi.org/10.1186/s40658-020-00346-3
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spelling doaj-c64dee91627545dbb4db43672a3774252020-12-20T12:05:24ZengSpringerOpenEJNMMI Physics2197-73642020-12-017111210.1186/s40658-020-00346-3Automated quantification of baseline imaging PET metrics on FDG PET/CT images of pediatric Hodgkin lymphoma patientsAmy J. Weisman0Jihyun Kim1Inki Lee2Kathleen M. McCarten3Sandy Kessel4Cindy L. Schwartz5Kara M. Kelly6Robert Jeraj7Steve Y. Cho8Tyler J. Bradshaw9Department of Medical Physics, University of Wisconsin-MadisonDepartment of Radiology, University of Wisconsin-MadisonDepartment of Nuclear Medicine Korea Cancer Centre Hospital, Korea Institute of Radiological and Medical SciencesIROC-Rhode IslandIROC-Rhode IslandMedical College of WisconsinDepartment of Pediatrics, Roswell Park Comprehensive Cancer Center, University at Buffalo Jacobs School of Medicine and Biomedical SciencesDepartment of Medical Physics, University of Wisconsin-MadisonDepartment of Radiology, University of Wisconsin-MadisonDepartment of Radiology, University of Wisconsin-MadisonAbstract Purpose For pediatric lymphoma, quantitative FDG PET/CT imaging features such as metabolic tumor volume (MTV) are important for prognosis and risk stratification strategies. However, feature extraction is difficult and time-consuming in cases of high disease burden. The purpose of this study was to fully automate the measurement of PET imaging features in PET/CT images of pediatric lymphoma. Methods 18F-FDG PET/CT baseline images of 100 pediatric Hodgkin lymphoma patients were retrospectively analyzed. Two nuclear medicine physicians identified and segmented FDG avid disease using PET thresholding methods. Both PET and CT images were used as inputs to a three-dimensional patch-based, multi-resolution pathway convolutional neural network architecture, DeepMedic. The model was trained to replicate physician segmentations using an ensemble of three networks trained with 5-fold cross-validation. The maximum SUV (SUVmax), MTV, total lesion glycolysis (TLG), surface-area-to-volume ratio (SA/MTV), and a measure of disease spread (Dmaxpatient) were extracted from the model output. Pearson’s correlation coefficient and relative percent differences were calculated between automated and physician-extracted features. Results Median Dice similarity coefficient of patient contours between automated and physician contours was 0.86 (IQR 0.78–0.91). Automated SUVmax values matched exactly the physician determined values in 81/100 cases, with Pearson’s correlation coefficient (R) of 0.95. Automated MTV was strongly correlated with physician MTV (R = 0.88), though it was slightly underestimated with a median (IQR) relative difference of − 4.3% (− 10.0–5.7%). Agreement of TLG was excellent (R = 0.94), with median (IQR) relative difference of − 0.4% (− 5.2–7.0%). Median relative percent differences were 6.8% (R = 0.91; IQR 1.6–4.3%) for SA/MTV, and 4.5% (R = 0.51; IQR − 7.5–40.9%) for Dmaxpatient, which was the most difficult feature to quantify automatically. Conclusions An automated method using an ensemble of multi-resolution pathway 3D CNNs was able to quantify PET imaging features of lymphoma on baseline FDG PET/CT images with excellent agreement to reference physician PET segmentation. Automated methods with faster throughput for PET quantitation, such as MTV and TLG, show promise in more accessible clinical and research applications.https://doi.org/10.1186/s40658-020-00346-3Pediatric lymphomaConvolutional neural networksImaging biomarkersPET
collection DOAJ
language English
format Article
sources DOAJ
author Amy J. Weisman
Jihyun Kim
Inki Lee
Kathleen M. McCarten
Sandy Kessel
Cindy L. Schwartz
Kara M. Kelly
Robert Jeraj
Steve Y. Cho
Tyler J. Bradshaw
spellingShingle Amy J. Weisman
Jihyun Kim
Inki Lee
Kathleen M. McCarten
Sandy Kessel
Cindy L. Schwartz
Kara M. Kelly
Robert Jeraj
Steve Y. Cho
Tyler J. Bradshaw
Automated quantification of baseline imaging PET metrics on FDG PET/CT images of pediatric Hodgkin lymphoma patients
EJNMMI Physics
Pediatric lymphoma
Convolutional neural networks
Imaging biomarkers
PET
author_facet Amy J. Weisman
Jihyun Kim
Inki Lee
Kathleen M. McCarten
Sandy Kessel
Cindy L. Schwartz
Kara M. Kelly
Robert Jeraj
Steve Y. Cho
Tyler J. Bradshaw
author_sort Amy J. Weisman
title Automated quantification of baseline imaging PET metrics on FDG PET/CT images of pediatric Hodgkin lymphoma patients
title_short Automated quantification of baseline imaging PET metrics on FDG PET/CT images of pediatric Hodgkin lymphoma patients
title_full Automated quantification of baseline imaging PET metrics on FDG PET/CT images of pediatric Hodgkin lymphoma patients
title_fullStr Automated quantification of baseline imaging PET metrics on FDG PET/CT images of pediatric Hodgkin lymphoma patients
title_full_unstemmed Automated quantification of baseline imaging PET metrics on FDG PET/CT images of pediatric Hodgkin lymphoma patients
title_sort automated quantification of baseline imaging pet metrics on fdg pet/ct images of pediatric hodgkin lymphoma patients
publisher SpringerOpen
series EJNMMI Physics
issn 2197-7364
publishDate 2020-12-01
description Abstract Purpose For pediatric lymphoma, quantitative FDG PET/CT imaging features such as metabolic tumor volume (MTV) are important for prognosis and risk stratification strategies. However, feature extraction is difficult and time-consuming in cases of high disease burden. The purpose of this study was to fully automate the measurement of PET imaging features in PET/CT images of pediatric lymphoma. Methods 18F-FDG PET/CT baseline images of 100 pediatric Hodgkin lymphoma patients were retrospectively analyzed. Two nuclear medicine physicians identified and segmented FDG avid disease using PET thresholding methods. Both PET and CT images were used as inputs to a three-dimensional patch-based, multi-resolution pathway convolutional neural network architecture, DeepMedic. The model was trained to replicate physician segmentations using an ensemble of three networks trained with 5-fold cross-validation. The maximum SUV (SUVmax), MTV, total lesion glycolysis (TLG), surface-area-to-volume ratio (SA/MTV), and a measure of disease spread (Dmaxpatient) were extracted from the model output. Pearson’s correlation coefficient and relative percent differences were calculated between automated and physician-extracted features. Results Median Dice similarity coefficient of patient contours between automated and physician contours was 0.86 (IQR 0.78–0.91). Automated SUVmax values matched exactly the physician determined values in 81/100 cases, with Pearson’s correlation coefficient (R) of 0.95. Automated MTV was strongly correlated with physician MTV (R = 0.88), though it was slightly underestimated with a median (IQR) relative difference of − 4.3% (− 10.0–5.7%). Agreement of TLG was excellent (R = 0.94), with median (IQR) relative difference of − 0.4% (− 5.2–7.0%). Median relative percent differences were 6.8% (R = 0.91; IQR 1.6–4.3%) for SA/MTV, and 4.5% (R = 0.51; IQR − 7.5–40.9%) for Dmaxpatient, which was the most difficult feature to quantify automatically. Conclusions An automated method using an ensemble of multi-resolution pathway 3D CNNs was able to quantify PET imaging features of lymphoma on baseline FDG PET/CT images with excellent agreement to reference physician PET segmentation. Automated methods with faster throughput for PET quantitation, such as MTV and TLG, show promise in more accessible clinical and research applications.
topic Pediatric lymphoma
Convolutional neural networks
Imaging biomarkers
PET
url https://doi.org/10.1186/s40658-020-00346-3
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