Analysis of the Complete Genome Sequence of Bacillus atrophaeus GQJK17 Reveals Its Biocontrol Characteristics as a Plant Growth-Promoting Rhizobacterium

Bacillus atrophaeus GQJK17 was isolated from the rhizosphere of Lycium barbarum L. in China, which was shown to be a plant growth-promoting rhizobacterium as a new biological agent against pathogenic fungi and gram-positive bacteria. We present its biological characteristics and complete genome sequ...

Full description

Bibliographic Details
Main Authors: Jinjin Ma, Chengqiang Wang, Haide Wang, Kai Liu, Tongrui Zhang, Liangtong Yao, Zhou Zhao, Binghai Du, Yanqin Ding
Format: Article
Language:English
Published: Hindawi Limited 2018-01-01
Series:BioMed Research International
Online Access:http://dx.doi.org/10.1155/2018/9473542
id doaj-c889385d074844bcb13dcd62f981fb3f
record_format Article
spelling doaj-c889385d074844bcb13dcd62f981fb3f2020-11-24T21:16:11ZengHindawi LimitedBioMed Research International2314-61332314-61412018-01-01201810.1155/2018/94735429473542Analysis of the Complete Genome Sequence of Bacillus atrophaeus GQJK17 Reveals Its Biocontrol Characteristics as a Plant Growth-Promoting RhizobacteriumJinjin Ma0Chengqiang Wang1Haide Wang2Kai Liu3Tongrui Zhang4Liangtong Yao5Zhou Zhao6Binghai Du7Yanqin Ding8College of Life Sciences, National Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Shandong Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai’an, ChinaCollege of Life Sciences, National Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Shandong Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai’an, ChinaCollege of Life Sciences, National Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Shandong Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai’an, ChinaCollege of Life Sciences, National Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Shandong Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai’an, ChinaCollege of Life Sciences, National Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Shandong Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai’an, ChinaCollege of Life Sciences, National Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Shandong Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai’an, ChinaCollege of Life Sciences, National Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Shandong Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai’an, ChinaCollege of Life Sciences, National Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Shandong Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai’an, ChinaCollege of Life Sciences, National Engineering Laboratory for Efficient Utilization of Soil and Fertilizer Resources, Shandong Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai’an, ChinaBacillus atrophaeus GQJK17 was isolated from the rhizosphere of Lycium barbarum L. in China, which was shown to be a plant growth-promoting rhizobacterium as a new biological agent against pathogenic fungi and gram-positive bacteria. We present its biological characteristics and complete genome sequence, which contains a 4,325,818 bp circular chromosome with 4,181 coding DNA sequences and a G+C content of 43.3%. A genome analysis revealed a total of 8 candidate gene clusters for producing antimicrobial secondary metabolites, including surfactin, bacillaene, fengycin, and bacillibactin. Some other antimicrobial and plant growth-promoting genes were also discovered. Our results provide insights into the genetic and biological basis of B. atrophaeus strains as a biocontrol agent for application in agriculture.http://dx.doi.org/10.1155/2018/9473542
collection DOAJ
language English
format Article
sources DOAJ
author Jinjin Ma
Chengqiang Wang
Haide Wang
Kai Liu
Tongrui Zhang
Liangtong Yao
Zhou Zhao
Binghai Du
Yanqin Ding
spellingShingle Jinjin Ma
Chengqiang Wang
Haide Wang
Kai Liu
Tongrui Zhang
Liangtong Yao
Zhou Zhao
Binghai Du
Yanqin Ding
Analysis of the Complete Genome Sequence of Bacillus atrophaeus GQJK17 Reveals Its Biocontrol Characteristics as a Plant Growth-Promoting Rhizobacterium
BioMed Research International
author_facet Jinjin Ma
Chengqiang Wang
Haide Wang
Kai Liu
Tongrui Zhang
Liangtong Yao
Zhou Zhao
Binghai Du
Yanqin Ding
author_sort Jinjin Ma
title Analysis of the Complete Genome Sequence of Bacillus atrophaeus GQJK17 Reveals Its Biocontrol Characteristics as a Plant Growth-Promoting Rhizobacterium
title_short Analysis of the Complete Genome Sequence of Bacillus atrophaeus GQJK17 Reveals Its Biocontrol Characteristics as a Plant Growth-Promoting Rhizobacterium
title_full Analysis of the Complete Genome Sequence of Bacillus atrophaeus GQJK17 Reveals Its Biocontrol Characteristics as a Plant Growth-Promoting Rhizobacterium
title_fullStr Analysis of the Complete Genome Sequence of Bacillus atrophaeus GQJK17 Reveals Its Biocontrol Characteristics as a Plant Growth-Promoting Rhizobacterium
title_full_unstemmed Analysis of the Complete Genome Sequence of Bacillus atrophaeus GQJK17 Reveals Its Biocontrol Characteristics as a Plant Growth-Promoting Rhizobacterium
title_sort analysis of the complete genome sequence of bacillus atrophaeus gqjk17 reveals its biocontrol characteristics as a plant growth-promoting rhizobacterium
publisher Hindawi Limited
series BioMed Research International
issn 2314-6133
2314-6141
publishDate 2018-01-01
description Bacillus atrophaeus GQJK17 was isolated from the rhizosphere of Lycium barbarum L. in China, which was shown to be a plant growth-promoting rhizobacterium as a new biological agent against pathogenic fungi and gram-positive bacteria. We present its biological characteristics and complete genome sequence, which contains a 4,325,818 bp circular chromosome with 4,181 coding DNA sequences and a G+C content of 43.3%. A genome analysis revealed a total of 8 candidate gene clusters for producing antimicrobial secondary metabolites, including surfactin, bacillaene, fengycin, and bacillibactin. Some other antimicrobial and plant growth-promoting genes were also discovered. Our results provide insights into the genetic and biological basis of B. atrophaeus strains as a biocontrol agent for application in agriculture.
url http://dx.doi.org/10.1155/2018/9473542
work_keys_str_mv AT jinjinma analysisofthecompletegenomesequenceofbacillusatrophaeusgqjk17revealsitsbiocontrolcharacteristicsasaplantgrowthpromotingrhizobacterium
AT chengqiangwang analysisofthecompletegenomesequenceofbacillusatrophaeusgqjk17revealsitsbiocontrolcharacteristicsasaplantgrowthpromotingrhizobacterium
AT haidewang analysisofthecompletegenomesequenceofbacillusatrophaeusgqjk17revealsitsbiocontrolcharacteristicsasaplantgrowthpromotingrhizobacterium
AT kailiu analysisofthecompletegenomesequenceofbacillusatrophaeusgqjk17revealsitsbiocontrolcharacteristicsasaplantgrowthpromotingrhizobacterium
AT tongruizhang analysisofthecompletegenomesequenceofbacillusatrophaeusgqjk17revealsitsbiocontrolcharacteristicsasaplantgrowthpromotingrhizobacterium
AT liangtongyao analysisofthecompletegenomesequenceofbacillusatrophaeusgqjk17revealsitsbiocontrolcharacteristicsasaplantgrowthpromotingrhizobacterium
AT zhouzhao analysisofthecompletegenomesequenceofbacillusatrophaeusgqjk17revealsitsbiocontrolcharacteristicsasaplantgrowthpromotingrhizobacterium
AT binghaidu analysisofthecompletegenomesequenceofbacillusatrophaeusgqjk17revealsitsbiocontrolcharacteristicsasaplantgrowthpromotingrhizobacterium
AT yanqinding analysisofthecompletegenomesequenceofbacillusatrophaeusgqjk17revealsitsbiocontrolcharacteristicsasaplantgrowthpromotingrhizobacterium
_version_ 1726016646263341056