Hybrid and Environmental Effects on Gene Expression in Poplar Clones in Pure and Mixed with Black Locust Stands

Mixed cropping might be seen as an alternative to monocultures by better protecting biodiversity and improving ecosystem services and resources. In the presented study, we tested the genetic and ecological effects of pure and mixed propagation of different poplar hybrids planted together with black...

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Main Authors: Oleksandra Kuchma, Dennis Janz, Ludger Leinemann, Andrea Polle, Konstantin V. Krutovsky, Oliver Gailing
Format: Article
Language:English
Published: MDPI AG 2020-10-01
Series:Forests
Subjects:
Online Access:https://www.mdpi.com/1999-4907/11/10/1075
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spelling doaj-c8f4f9f8e98343e795c490997883a7712020-11-25T02:19:30ZengMDPI AGForests1999-49072020-10-01111075107510.3390/f11101075Hybrid and Environmental Effects on Gene Expression in Poplar Clones in Pure and Mixed with Black Locust StandsOleksandra Kuchma0Dennis Janz1Ludger Leinemann2Andrea Polle3Konstantin V. Krutovsky4Oliver Gailing5Forest Genetics and Forest Tree Breeding, University of Göttingen, Büsgenweg 2, 37077 Göttingen, GermanyForest Botany and Tree Physiology, University of Göttingen, Büsgenweg 2, 37077 Göttingen, GermanyForest Genetics and Forest Tree Breeding, University of Göttingen, Büsgenweg 2, 37077 Göttingen, GermanyCenter for Integrated Breeding Research (CiBreed), University of Göttingen, Albrecht-Thaer-Weg 3, 37075 Göttingen, GermanyForest Genetics and Forest Tree Breeding, University of Göttingen, Büsgenweg 2, 37077 Göttingen, GermanyForest Genetics and Forest Tree Breeding, University of Göttingen, Büsgenweg 2, 37077 Göttingen, GermanyMixed cropping might be seen as an alternative to monocultures by better protecting biodiversity and improving ecosystem services and resources. In the presented study, we tested the genetic and ecological effects of pure and mixed propagation of different poplar hybrids planted together with black locust trees. Poplar (<i>Populus</i>) hybrids are widely used for bioenergy in monoculture systems due to their rapid and high biomass production. Black locust (<i>Robinia</i><i> </i><i>pseudoacacia</i> L.) is a species with the ability to fix nitrogen and seen as a promising candidate for mixed cultivation. Eight different poplar hybrids and black locust trees from three provenances planted in two study sites with different environmental conditions were tested in varying combinations in pure and mixed stands to observe effects of the different hybrids and genotypes, site conditions and the mixed growing on the performance of poplar and its gene expression. Transcriptome analyses of leaves from four poplar clones selected according to their divergent growth performance were conducted to study differential gene expression that can be an important indicator of differences in growing conditions and success. Differences in gene expression were most pronounced among hybrids and different genotypes of the same hybrid, followed by the study site influence, and were least pronounced between mixed and pure stands. The genotypes of the same hybrid were clearly separated from each other. Clear separation between the study sites for all clones was also observed. Only a few genes were differently expressed in pure vs. mixed stand comparisons for each clone, but there were no common genes that were differently expressed in pure vs. mixed stands in all clones. In total, 199 genes showed differential expression between the study sites regardless of poplar clone or type of stands. The analysis suggested that plant genotypes and environmental conditions were more important at the early stage of stand development than pure or mixed cultivation.https://www.mdpi.com/1999-4907/11/10/1075black locustdifferentially expressed genesmixed standsmonoculturepoplartranscriptome
collection DOAJ
language English
format Article
sources DOAJ
author Oleksandra Kuchma
Dennis Janz
Ludger Leinemann
Andrea Polle
Konstantin V. Krutovsky
Oliver Gailing
spellingShingle Oleksandra Kuchma
Dennis Janz
Ludger Leinemann
Andrea Polle
Konstantin V. Krutovsky
Oliver Gailing
Hybrid and Environmental Effects on Gene Expression in Poplar Clones in Pure and Mixed with Black Locust Stands
Forests
black locust
differentially expressed genes
mixed stands
monoculture
poplar
transcriptome
author_facet Oleksandra Kuchma
Dennis Janz
Ludger Leinemann
Andrea Polle
Konstantin V. Krutovsky
Oliver Gailing
author_sort Oleksandra Kuchma
title Hybrid and Environmental Effects on Gene Expression in Poplar Clones in Pure and Mixed with Black Locust Stands
title_short Hybrid and Environmental Effects on Gene Expression in Poplar Clones in Pure and Mixed with Black Locust Stands
title_full Hybrid and Environmental Effects on Gene Expression in Poplar Clones in Pure and Mixed with Black Locust Stands
title_fullStr Hybrid and Environmental Effects on Gene Expression in Poplar Clones in Pure and Mixed with Black Locust Stands
title_full_unstemmed Hybrid and Environmental Effects on Gene Expression in Poplar Clones in Pure and Mixed with Black Locust Stands
title_sort hybrid and environmental effects on gene expression in poplar clones in pure and mixed with black locust stands
publisher MDPI AG
series Forests
issn 1999-4907
publishDate 2020-10-01
description Mixed cropping might be seen as an alternative to monocultures by better protecting biodiversity and improving ecosystem services and resources. In the presented study, we tested the genetic and ecological effects of pure and mixed propagation of different poplar hybrids planted together with black locust trees. Poplar (<i>Populus</i>) hybrids are widely used for bioenergy in monoculture systems due to their rapid and high biomass production. Black locust (<i>Robinia</i><i> </i><i>pseudoacacia</i> L.) is a species with the ability to fix nitrogen and seen as a promising candidate for mixed cultivation. Eight different poplar hybrids and black locust trees from three provenances planted in two study sites with different environmental conditions were tested in varying combinations in pure and mixed stands to observe effects of the different hybrids and genotypes, site conditions and the mixed growing on the performance of poplar and its gene expression. Transcriptome analyses of leaves from four poplar clones selected according to their divergent growth performance were conducted to study differential gene expression that can be an important indicator of differences in growing conditions and success. Differences in gene expression were most pronounced among hybrids and different genotypes of the same hybrid, followed by the study site influence, and were least pronounced between mixed and pure stands. The genotypes of the same hybrid were clearly separated from each other. Clear separation between the study sites for all clones was also observed. Only a few genes were differently expressed in pure vs. mixed stand comparisons for each clone, but there were no common genes that were differently expressed in pure vs. mixed stands in all clones. In total, 199 genes showed differential expression between the study sites regardless of poplar clone or type of stands. The analysis suggested that plant genotypes and environmental conditions were more important at the early stage of stand development than pure or mixed cultivation.
topic black locust
differentially expressed genes
mixed stands
monoculture
poplar
transcriptome
url https://www.mdpi.com/1999-4907/11/10/1075
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