DNA Mini-Barcodes as A Molecular Marker for Various Hairtail Fish Products Traceability
Hairtail fishery is an important fishery commodity with high economic value as export commodity. Authentication based on DNA mini-barcodes can be applied to overcome seafood fraud and to support Indonesian traceability system. This study was aimed to design species-specific primers of DNA minibarcod...
Main Authors: | , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Bogor Agricultural University
2019-04-01
|
Series: | Jurnal Pengolahan Hasil Perikanan Indonesia |
Subjects: | |
Online Access: | http://journal.ipb.ac.id/index.php/jphpi/article/view/25874 |
id |
doaj-ca16143159114cdd9bdd22229f6ff6cf |
---|---|
record_format |
Article |
spelling |
doaj-ca16143159114cdd9bdd22229f6ff6cf2020-11-25T02:21:54ZengBogor Agricultural UniversityJurnal Pengolahan Hasil Perikanan Indonesia2303-21112354-886X2019-04-01221334010.17844/jphpi.v22i1.2587415937DNA Mini-Barcodes as A Molecular Marker for Various Hairtail Fish Products TraceabilityAsadatun Abdullah0Mala Nurilmala1Kinanti Permata Sitaresmi2Departemen Teknologi Hasil Perairan, Fakultas Perikanan dan Ilmu Kelautan, Institut Pertanian Bogor Jalan Lingkar Akademik Kampus IPB Dramaga, Bogor, Jawa BaratDepartemen Teknologi Hasil Perairan, Fakultas Perikanan dan Ilmu Kelautan, Institut Pertanian Bogor Jalan Lingkar Akademik Kampus IPB Dramaga, Bogor, Jawa BaratDepartemen Teknologi Hasil Perairan, Fakultas Perikanan dan Ilmu Kelautan, Institut Pertanian Bogor Jalan Lingkar Akademik Kampus IPB Dramaga, Bogor, Jawa BaratHairtail fishery is an important fishery commodity with high economic value as export commodity. Authentication based on DNA mini-barcodes can be applied to overcome seafood fraud and to support Indonesian traceability system. This study was aimed to design species-specific primers of DNA minibarcodes and authentication of various processed hairtail fish products such as smoked, baked, fried, canned, and boiled. Analytical method applied PCR-based of cytochrome c oxidase 1 (COI) full length and mini-barcodes. Mini-barcode primer specific for hairtail (Trichiurus lepturus) successfully amplified DNA of processed hairtail fish. The BLAST analysis showed the samples were identified as Trichiurus sp. and T. lepturus with homology level of 91% to 100%. Phylogenetic analysis showed the processed sample (LC dan LD) were in the same group with T. lepturus.http://journal.ipb.ac.id/index.php/jphpi/article/view/25874authentication, primer design, dna mini-barcodes, hairtail fish, mislabelling |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Asadatun Abdullah Mala Nurilmala Kinanti Permata Sitaresmi |
spellingShingle |
Asadatun Abdullah Mala Nurilmala Kinanti Permata Sitaresmi DNA Mini-Barcodes as A Molecular Marker for Various Hairtail Fish Products Traceability Jurnal Pengolahan Hasil Perikanan Indonesia authentication, primer design, dna mini-barcodes, hairtail fish, mislabelling |
author_facet |
Asadatun Abdullah Mala Nurilmala Kinanti Permata Sitaresmi |
author_sort |
Asadatun Abdullah |
title |
DNA Mini-Barcodes as A Molecular Marker for Various Hairtail Fish Products Traceability |
title_short |
DNA Mini-Barcodes as A Molecular Marker for Various Hairtail Fish Products Traceability |
title_full |
DNA Mini-Barcodes as A Molecular Marker for Various Hairtail Fish Products Traceability |
title_fullStr |
DNA Mini-Barcodes as A Molecular Marker for Various Hairtail Fish Products Traceability |
title_full_unstemmed |
DNA Mini-Barcodes as A Molecular Marker for Various Hairtail Fish Products Traceability |
title_sort |
dna mini-barcodes as a molecular marker for various hairtail fish products traceability |
publisher |
Bogor Agricultural University |
series |
Jurnal Pengolahan Hasil Perikanan Indonesia |
issn |
2303-2111 2354-886X |
publishDate |
2019-04-01 |
description |
Hairtail fishery is an important fishery commodity with high economic value as export commodity. Authentication based on DNA mini-barcodes can be applied to overcome seafood fraud and to support Indonesian traceability system. This study was aimed to design species-specific primers of DNA minibarcodes and authentication of various processed hairtail fish products such as smoked, baked, fried, canned, and boiled. Analytical method applied PCR-based of cytochrome c oxidase 1 (COI) full length and
mini-barcodes. Mini-barcode primer specific for hairtail (Trichiurus lepturus) successfully amplified DNA of processed hairtail fish. The BLAST analysis showed the samples were identified as Trichiurus sp. and T. lepturus with homology level of 91% to 100%. Phylogenetic analysis showed the processed sample (LC dan LD) were in the same group with T. lepturus. |
topic |
authentication, primer design, dna mini-barcodes, hairtail fish, mislabelling |
url |
http://journal.ipb.ac.id/index.php/jphpi/article/view/25874 |
work_keys_str_mv |
AT asadatunabdullah dnaminibarcodesasamolecularmarkerforvarioushairtailfishproductstraceability AT malanurilmala dnaminibarcodesasamolecularmarkerforvarioushairtailfishproductstraceability AT kinantipermatasitaresmi dnaminibarcodesasamolecularmarkerforvarioushairtailfishproductstraceability |
_version_ |
1724864782318698496 |