Metagenomic Sequencing of Diamondback Moth Gut Microbiome Unveils Key Holobiont Adaptations for Herbivory

Herbivore specialists adapt to feed on a specific group of host plants by evolving various mechanisms to respond to plant defenses. Insects also possess complex gut microbiotas but their potential role in adaptation is poorly understood. Our previous study of the genome of diamondback moth, Plutella...

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Main Authors: Minsheng You, Xiaofeng Xia, Geoff M. Gurr, Liette Vasseur, Dandan Zheng, Huanzi Zhong, Bingcai Qin, Junhan Lin, Yue Wang, FengQin Song, Yong Li, Hailan Lin
Format: Article
Language:English
Published: Frontiers Media S.A. 2017-04-01
Series:Frontiers in Microbiology
Subjects:
Online Access:http://journal.frontiersin.org/article/10.3389/fmicb.2017.00663/full
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author Minsheng You
Minsheng You
Minsheng You
Minsheng You
Xiaofeng Xia
Xiaofeng Xia
Xiaofeng Xia
Xiaofeng Xia
Geoff M. Gurr
Geoff M. Gurr
Geoff M. Gurr
Geoff M. Gurr
Liette Vasseur
Liette Vasseur
Liette Vasseur
Liette Vasseur
Dandan Zheng
Dandan Zheng
Dandan Zheng
Dandan Zheng
Huanzi Zhong
Bingcai Qin
Junhan Lin
Junhan Lin
Junhan Lin
Junhan Lin
Yue Wang
Yue Wang
Yue Wang
Yue Wang
FengQin Song
FengQin Song
FengQin Song
FengQin Song
Yong Li
Yong Li
Yong Li
Yong Li
Hailan Lin
Hailan Lin
Hailan Lin
Hailan Lin
spellingShingle Minsheng You
Minsheng You
Minsheng You
Minsheng You
Xiaofeng Xia
Xiaofeng Xia
Xiaofeng Xia
Xiaofeng Xia
Geoff M. Gurr
Geoff M. Gurr
Geoff M. Gurr
Geoff M. Gurr
Liette Vasseur
Liette Vasseur
Liette Vasseur
Liette Vasseur
Dandan Zheng
Dandan Zheng
Dandan Zheng
Dandan Zheng
Huanzi Zhong
Bingcai Qin
Junhan Lin
Junhan Lin
Junhan Lin
Junhan Lin
Yue Wang
Yue Wang
Yue Wang
Yue Wang
FengQin Song
FengQin Song
FengQin Song
FengQin Song
Yong Li
Yong Li
Yong Li
Yong Li
Hailan Lin
Hailan Lin
Hailan Lin
Hailan Lin
Metagenomic Sequencing of Diamondback Moth Gut Microbiome Unveils Key Holobiont Adaptations for Herbivory
Frontiers in Microbiology
diamondback moth
bacteria diversity
gut symbiosis
carbohydrate biodegradation
plant defense
phenolic compounds
author_facet Minsheng You
Minsheng You
Minsheng You
Minsheng You
Xiaofeng Xia
Xiaofeng Xia
Xiaofeng Xia
Xiaofeng Xia
Geoff M. Gurr
Geoff M. Gurr
Geoff M. Gurr
Geoff M. Gurr
Liette Vasseur
Liette Vasseur
Liette Vasseur
Liette Vasseur
Dandan Zheng
Dandan Zheng
Dandan Zheng
Dandan Zheng
Huanzi Zhong
Bingcai Qin
Junhan Lin
Junhan Lin
Junhan Lin
Junhan Lin
Yue Wang
Yue Wang
Yue Wang
Yue Wang
FengQin Song
FengQin Song
FengQin Song
FengQin Song
Yong Li
Yong Li
Yong Li
Yong Li
Hailan Lin
Hailan Lin
Hailan Lin
Hailan Lin
author_sort Minsheng You
title Metagenomic Sequencing of Diamondback Moth Gut Microbiome Unveils Key Holobiont Adaptations for Herbivory
title_short Metagenomic Sequencing of Diamondback Moth Gut Microbiome Unveils Key Holobiont Adaptations for Herbivory
title_full Metagenomic Sequencing of Diamondback Moth Gut Microbiome Unveils Key Holobiont Adaptations for Herbivory
title_fullStr Metagenomic Sequencing of Diamondback Moth Gut Microbiome Unveils Key Holobiont Adaptations for Herbivory
title_full_unstemmed Metagenomic Sequencing of Diamondback Moth Gut Microbiome Unveils Key Holobiont Adaptations for Herbivory
title_sort metagenomic sequencing of diamondback moth gut microbiome unveils key holobiont adaptations for herbivory
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2017-04-01
description Herbivore specialists adapt to feed on a specific group of host plants by evolving various mechanisms to respond to plant defenses. Insects also possess complex gut microbiotas but their potential role in adaptation is poorly understood. Our previous study of the genome of diamondback moth, Plutella xylostella, revealed an intrinsic capacity to detoxify plant defense compounds, which is an important factor in its success as a pest. Here we expand on that work with a complete taxonomic and functional profile of the P. xylostella gut microbiota obtained by metagenomic sequencing. Gene enrichment in the metagenome, accompanied by functional identification, revealed an important role of specific gut bacteria in the breakdown of plant cell walls, detoxification of plant phenolics, and synthesis of amino acids. Microbes participating in these pathways mainly belonged to three highly abundant bacteria: Enterobacter cloacae, Enterobacter asburiae, and Carnobacterium maltaromaticum. Results show that while the gut microbial community may be complex, a small number of functionally active species can be disproportionally important. The presence of specific enzymes in the microbiota community, such as supporting amino acid synthesis, digestion and detoxification functions, demonstrates the beneficial interactions between P. xylostella and its gut microbiota. These interactions can be potential targets for manipulation to provide novel pest management approaches.
topic diamondback moth
bacteria diversity
gut symbiosis
carbohydrate biodegradation
plant defense
phenolic compounds
url http://journal.frontiersin.org/article/10.3389/fmicb.2017.00663/full
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spelling doaj-ca862d84f7af44a3963c57be72da352a2020-11-24T21:44:36ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2017-04-01810.3389/fmicb.2017.00663259102Metagenomic Sequencing of Diamondback Moth Gut Microbiome Unveils Key Holobiont Adaptations for HerbivoryMinsheng You0Minsheng You1Minsheng You2Minsheng You3Xiaofeng Xia4Xiaofeng Xia5Xiaofeng Xia6Xiaofeng Xia7Geoff M. Gurr8Geoff M. Gurr9Geoff M. Gurr10Geoff M. Gurr11Liette Vasseur12Liette Vasseur13Liette Vasseur14Liette Vasseur15Dandan Zheng16Dandan Zheng17Dandan Zheng18Dandan Zheng19Huanzi Zhong20Bingcai Qin21Junhan Lin22Junhan Lin23Junhan Lin24Junhan Lin25Yue Wang26Yue Wang27Yue Wang28Yue Wang29FengQin Song30FengQin Song31FengQin Song32FengQin Song33Yong Li34Yong Li35Yong Li36Yong Li37Hailan Lin38Hailan Lin39Hailan Lin40Hailan Lin41State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry UniversityFuzhou, ChinaInstitute of Applied Ecology, Fujian Agriculture and Forestry UniversityFuzhou, ChinaKey Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of AgricultureFuzhou, ChinaFujian-Taiwan Joint Innovation Centre for Ecological Control of Crop Pests, Fujian Agriculture and Forestry UniversityFuzhou, ChinaState Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry UniversityFuzhou, ChinaInstitute of Applied Ecology, Fujian Agriculture and Forestry UniversityFuzhou, ChinaKey Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of AgricultureFuzhou, ChinaFujian-Taiwan Joint Innovation Centre for Ecological Control of Crop Pests, Fujian Agriculture and Forestry UniversityFuzhou, ChinaState Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry UniversityFuzhou, ChinaInstitute of Applied Ecology, Fujian Agriculture and Forestry UniversityFuzhou, ChinaKey Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of AgricultureFuzhou, ChinaGraham Centre, Charles Sturt UniversityOrange, NSW, AustraliaState Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry UniversityFuzhou, ChinaInstitute of Applied Ecology, Fujian Agriculture and Forestry UniversityFuzhou, ChinaKey Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of AgricultureFuzhou, ChinaDepartment of Biological Sciences, Brock UniversitySt. Catharines, ON, CanadaState Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry UniversityFuzhou, ChinaInstitute of Applied Ecology, Fujian Agriculture and Forestry UniversityFuzhou, ChinaKey Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of AgricultureFuzhou, ChinaFujian-Taiwan Joint Innovation Centre for Ecological Control of Crop Pests, Fujian Agriculture and Forestry UniversityFuzhou, ChinaBGI-ShenzhenShenzhen, ChinaBGI-ShenzhenShenzhen, ChinaState Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry UniversityFuzhou, ChinaInstitute of Applied Ecology, Fujian Agriculture and Forestry UniversityFuzhou, ChinaKey Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of AgricultureFuzhou, ChinaFujian-Taiwan Joint Innovation Centre for Ecological Control of Crop Pests, Fujian Agriculture and Forestry UniversityFuzhou, ChinaState Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry UniversityFuzhou, ChinaInstitute of Applied Ecology, Fujian Agriculture and Forestry UniversityFuzhou, ChinaKey Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of AgricultureFuzhou, ChinaFujian-Taiwan Joint Innovation Centre for Ecological Control of Crop Pests, Fujian Agriculture and Forestry UniversityFuzhou, ChinaState Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry UniversityFuzhou, ChinaInstitute of Applied Ecology, Fujian Agriculture and Forestry UniversityFuzhou, ChinaKey Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of AgricultureFuzhou, ChinaFujian-Taiwan Joint Innovation Centre for Ecological Control of Crop Pests, Fujian Agriculture and Forestry UniversityFuzhou, ChinaState Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry UniversityFuzhou, ChinaInstitute of Applied Ecology, Fujian Agriculture and Forestry UniversityFuzhou, ChinaKey Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of AgricultureFuzhou, ChinaFujian-Taiwan Joint Innovation Centre for Ecological Control of Crop Pests, Fujian Agriculture and Forestry UniversityFuzhou, ChinaState Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry UniversityFuzhou, ChinaInstitute of Applied Ecology, Fujian Agriculture and Forestry UniversityFuzhou, ChinaKey Laboratory of Integrated Pest Management for Fujian-Taiwan Crops, Ministry of AgricultureFuzhou, ChinaFujian-Taiwan Joint Innovation Centre for Ecological Control of Crop Pests, Fujian Agriculture and Forestry UniversityFuzhou, ChinaHerbivore specialists adapt to feed on a specific group of host plants by evolving various mechanisms to respond to plant defenses. Insects also possess complex gut microbiotas but their potential role in adaptation is poorly understood. Our previous study of the genome of diamondback moth, Plutella xylostella, revealed an intrinsic capacity to detoxify plant defense compounds, which is an important factor in its success as a pest. Here we expand on that work with a complete taxonomic and functional profile of the P. xylostella gut microbiota obtained by metagenomic sequencing. Gene enrichment in the metagenome, accompanied by functional identification, revealed an important role of specific gut bacteria in the breakdown of plant cell walls, detoxification of plant phenolics, and synthesis of amino acids. Microbes participating in these pathways mainly belonged to three highly abundant bacteria: Enterobacter cloacae, Enterobacter asburiae, and Carnobacterium maltaromaticum. Results show that while the gut microbial community may be complex, a small number of functionally active species can be disproportionally important. The presence of specific enzymes in the microbiota community, such as supporting amino acid synthesis, digestion and detoxification functions, demonstrates the beneficial interactions between P. xylostella and its gut microbiota. These interactions can be potential targets for manipulation to provide novel pest management approaches.http://journal.frontiersin.org/article/10.3389/fmicb.2017.00663/fulldiamondback mothbacteria diversitygut symbiosiscarbohydrate biodegradationplant defensephenolic compounds