Disentangling the genetic bases of Saccharomyces cerevisiae nitrogen consumption and adaptation to low nitrogen environments in wine fermentation

Abstract The budding yeast Saccharomyces cerevisiae has been considered for more than 20 years as a premier model organism for biological sciences, also being the main microorganism used in wide industrial applications, like alcoholic fermentation in the winemaking process. Grape juice is a challeng...

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Main Authors: Eduardo I. Kessi-Pérez, Jennifer Molinet, Claudio Martínez
Format: Article
Language:English
Published: BMC 2020-01-01
Series:Biological Research
Subjects:
Online Access:https://doi.org/10.1186/s40659-019-0270-3
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spelling doaj-cb33f9e3f2a7448e83114402d807edc22021-01-10T12:15:09ZengBMCBiological Research0717-62872020-01-0153111010.1186/s40659-019-0270-3Disentangling the genetic bases of Saccharomyces cerevisiae nitrogen consumption and adaptation to low nitrogen environments in wine fermentationEduardo I. Kessi-Pérez0Jennifer Molinet1Claudio Martínez2Departamento de Ciencia y Tecnología de los Alimentos, Universidad de Santiago de Chile (USACH)Departamento de Ciencia y Tecnología de los Alimentos, Universidad de Santiago de Chile (USACH)Departamento de Ciencia y Tecnología de los Alimentos, Universidad de Santiago de Chile (USACH)Abstract The budding yeast Saccharomyces cerevisiae has been considered for more than 20 years as a premier model organism for biological sciences, also being the main microorganism used in wide industrial applications, like alcoholic fermentation in the winemaking process. Grape juice is a challenging environment for S. cerevisiae, with nitrogen deficiencies impairing fermentation rate and yeast biomass production, causing stuck or sluggish fermentations, thus generating sizeable economic losses for wine industry. In the present review, we summarize some recent efforts in the search of causative genes that account for yeast adaptation to low nitrogen environments, specially focused in wine fermentation conditions. We start presenting a brief perspective of yeast nitrogen utilization under wine fermentative conditions, highlighting yeast preference for some nitrogen sources above others. Then, we give an outlook of S. cerevisiae genetic diversity studies, paying special attention to efforts in genome sequencing for population structure determination and presenting QTL mapping as a powerful tool for phenotype–genotype correlations. Finally, we do a recapitulation of S. cerevisiae natural diversity related to low nitrogen adaptation, specially showing how different studies have left in evidence the central role of the TORC1 signalling pathway in nitrogen utilization and positioned wild S. cerevisiae strains as a reservoir of beneficial alleles with potential industrial applications (e.g. improvement of industrial yeasts for wine production). More studies focused in disentangling the genetic bases of S. cerevisiae adaptation in wine fermentation will be key to determine the domestication effects over low nitrogen adaptation, as well as to definitely proof that wild S. cerevisiae strains have potential genetic determinants for better adaptation to low nitrogen conditions.https://doi.org/10.1186/s40659-019-0270-3Saccharomyces cerevisiaeWine yeastsNitrogen consumptionWine fermentationNatural variationWild alleles
collection DOAJ
language English
format Article
sources DOAJ
author Eduardo I. Kessi-Pérez
Jennifer Molinet
Claudio Martínez
spellingShingle Eduardo I. Kessi-Pérez
Jennifer Molinet
Claudio Martínez
Disentangling the genetic bases of Saccharomyces cerevisiae nitrogen consumption and adaptation to low nitrogen environments in wine fermentation
Biological Research
Saccharomyces cerevisiae
Wine yeasts
Nitrogen consumption
Wine fermentation
Natural variation
Wild alleles
author_facet Eduardo I. Kessi-Pérez
Jennifer Molinet
Claudio Martínez
author_sort Eduardo I. Kessi-Pérez
title Disentangling the genetic bases of Saccharomyces cerevisiae nitrogen consumption and adaptation to low nitrogen environments in wine fermentation
title_short Disentangling the genetic bases of Saccharomyces cerevisiae nitrogen consumption and adaptation to low nitrogen environments in wine fermentation
title_full Disentangling the genetic bases of Saccharomyces cerevisiae nitrogen consumption and adaptation to low nitrogen environments in wine fermentation
title_fullStr Disentangling the genetic bases of Saccharomyces cerevisiae nitrogen consumption and adaptation to low nitrogen environments in wine fermentation
title_full_unstemmed Disentangling the genetic bases of Saccharomyces cerevisiae nitrogen consumption and adaptation to low nitrogen environments in wine fermentation
title_sort disentangling the genetic bases of saccharomyces cerevisiae nitrogen consumption and adaptation to low nitrogen environments in wine fermentation
publisher BMC
series Biological Research
issn 0717-6287
publishDate 2020-01-01
description Abstract The budding yeast Saccharomyces cerevisiae has been considered for more than 20 years as a premier model organism for biological sciences, also being the main microorganism used in wide industrial applications, like alcoholic fermentation in the winemaking process. Grape juice is a challenging environment for S. cerevisiae, with nitrogen deficiencies impairing fermentation rate and yeast biomass production, causing stuck or sluggish fermentations, thus generating sizeable economic losses for wine industry. In the present review, we summarize some recent efforts in the search of causative genes that account for yeast adaptation to low nitrogen environments, specially focused in wine fermentation conditions. We start presenting a brief perspective of yeast nitrogen utilization under wine fermentative conditions, highlighting yeast preference for some nitrogen sources above others. Then, we give an outlook of S. cerevisiae genetic diversity studies, paying special attention to efforts in genome sequencing for population structure determination and presenting QTL mapping as a powerful tool for phenotype–genotype correlations. Finally, we do a recapitulation of S. cerevisiae natural diversity related to low nitrogen adaptation, specially showing how different studies have left in evidence the central role of the TORC1 signalling pathway in nitrogen utilization and positioned wild S. cerevisiae strains as a reservoir of beneficial alleles with potential industrial applications (e.g. improvement of industrial yeasts for wine production). More studies focused in disentangling the genetic bases of S. cerevisiae adaptation in wine fermentation will be key to determine the domestication effects over low nitrogen adaptation, as well as to definitely proof that wild S. cerevisiae strains have potential genetic determinants for better adaptation to low nitrogen conditions.
topic Saccharomyces cerevisiae
Wine yeasts
Nitrogen consumption
Wine fermentation
Natural variation
Wild alleles
url https://doi.org/10.1186/s40659-019-0270-3
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AT jennifermolinet disentanglingthegeneticbasesofsaccharomycescerevisiaenitrogenconsumptionandadaptationtolownitrogenenvironmentsinwinefermentation
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