Detecting Bacterial Biofilms Using Fluorescence Hyperspectral Imaging and Various Discriminant Analyses

Biofilms formed on the surface of agro-food processing facilities can cause food poisoning by providing an environment in which bacteria can be cultured. Therefore, hygiene management through initial detection is important. This study aimed to assess the feasibility of detecting <i>Escherichia...

Full description

Bibliographic Details
Main Authors: Ahyeong Lee, Saetbyeol Park, Jinyoung Yoo, Jungsook Kang, Jongguk Lim, Youngwook Seo, Balgeum Kim, Giyoung Kim
Format: Article
Language:English
Published: MDPI AG 2021-03-01
Series:Sensors
Subjects:
Online Access:https://www.mdpi.com/1424-8220/21/6/2213
id doaj-cd78d2b34340420fb704ee52a9171d18
record_format Article
spelling doaj-cd78d2b34340420fb704ee52a9171d182021-03-23T00:02:31ZengMDPI AGSensors1424-82202021-03-01212213221310.3390/s21062213Detecting Bacterial Biofilms Using Fluorescence Hyperspectral Imaging and Various Discriminant AnalysesAhyeong Lee0Saetbyeol Park1Jinyoung Yoo2Jungsook Kang3Jongguk Lim4Youngwook Seo5Balgeum Kim6Giyoung Kim7Rural Development Administration, 310 Nongsaengmyeng-ro, Deokjin-gu, Jeonju 54875, KoreaRural Development Administration, 310 Nongsaengmyeng-ro, Deokjin-gu, Jeonju 54875, KoreaRural Development Administration, 310 Nongsaengmyeng-ro, Deokjin-gu, Jeonju 54875, KoreaRural Development Administration, 310 Nongsaengmyeng-ro, Deokjin-gu, Jeonju 54875, KoreaRural Development Administration, 310 Nongsaengmyeng-ro, Deokjin-gu, Jeonju 54875, KoreaRural Development Administration, 310 Nongsaengmyeng-ro, Deokjin-gu, Jeonju 54875, KoreaRural Development Administration, 310 Nongsaengmyeng-ro, Deokjin-gu, Jeonju 54875, KoreaRural Development Administration, 310 Nongsaengmyeng-ro, Deokjin-gu, Jeonju 54875, KoreaBiofilms formed on the surface of agro-food processing facilities can cause food poisoning by providing an environment in which bacteria can be cultured. Therefore, hygiene management through initial detection is important. This study aimed to assess the feasibility of detecting <i>Escherichia coli </i>(<i>E. coli</i>) and <i>Salmonella typhimurium</i> (<i>S. typhimurium</i>) on the surface of food processing facilities by using fluorescence hyperspectral imaging. <i>E. coli</i> and <i>S. typhimurium</i> were cultured on high-density polyethylene and stainless steel coupons, which are the main materials used in food processing facilities. We obtained fluorescence hyperspectral images for the range of 420–730 nm by emitting UV light from a 365 nm UV light source. The images were used to perform discriminant analyses (linear discriminant analysis, <i>k</i>-nearest neighbor analysis, and partial-least squares discriminant analysis) to identify and classify coupons on which bacteria could be cultured. The discriminant performances of specificity and sensitivity for <i>E. coli </i>(1–4 log CFU·cm<sup>−2</sup>) and <i>S. typhimurium </i>(1–6 log CFU·cm<sup>−2</sup>) were over 90% for most machine learning models used, and the highest performances were generally obtained from the <i>k</i>-nearest neighbor (<i>k</i>-NN) model. The application of the learning model to the hyperspectral image confirmed that the biofilm detection was well performed. This result indicates the possibility of rapidly inspecting biofilms using fluorescence hyperspectral images.https://www.mdpi.com/1424-8220/21/6/2213<i>E. coli</i><i>S</i> <i>. typhimuriu</i> <i>m</i>biofilmhyperspectral imagingdiscriminant analysis
collection DOAJ
language English
format Article
sources DOAJ
author Ahyeong Lee
Saetbyeol Park
Jinyoung Yoo
Jungsook Kang
Jongguk Lim
Youngwook Seo
Balgeum Kim
Giyoung Kim
spellingShingle Ahyeong Lee
Saetbyeol Park
Jinyoung Yoo
Jungsook Kang
Jongguk Lim
Youngwook Seo
Balgeum Kim
Giyoung Kim
Detecting Bacterial Biofilms Using Fluorescence Hyperspectral Imaging and Various Discriminant Analyses
Sensors
<i>E. coli</i>
<i>S</i> <i>. typhimuriu</i> <i>m</i>
biofilm
hyperspectral imaging
discriminant analysis
author_facet Ahyeong Lee
Saetbyeol Park
Jinyoung Yoo
Jungsook Kang
Jongguk Lim
Youngwook Seo
Balgeum Kim
Giyoung Kim
author_sort Ahyeong Lee
title Detecting Bacterial Biofilms Using Fluorescence Hyperspectral Imaging and Various Discriminant Analyses
title_short Detecting Bacterial Biofilms Using Fluorescence Hyperspectral Imaging and Various Discriminant Analyses
title_full Detecting Bacterial Biofilms Using Fluorescence Hyperspectral Imaging and Various Discriminant Analyses
title_fullStr Detecting Bacterial Biofilms Using Fluorescence Hyperspectral Imaging and Various Discriminant Analyses
title_full_unstemmed Detecting Bacterial Biofilms Using Fluorescence Hyperspectral Imaging and Various Discriminant Analyses
title_sort detecting bacterial biofilms using fluorescence hyperspectral imaging and various discriminant analyses
publisher MDPI AG
series Sensors
issn 1424-8220
publishDate 2021-03-01
description Biofilms formed on the surface of agro-food processing facilities can cause food poisoning by providing an environment in which bacteria can be cultured. Therefore, hygiene management through initial detection is important. This study aimed to assess the feasibility of detecting <i>Escherichia coli </i>(<i>E. coli</i>) and <i>Salmonella typhimurium</i> (<i>S. typhimurium</i>) on the surface of food processing facilities by using fluorescence hyperspectral imaging. <i>E. coli</i> and <i>S. typhimurium</i> were cultured on high-density polyethylene and stainless steel coupons, which are the main materials used in food processing facilities. We obtained fluorescence hyperspectral images for the range of 420–730 nm by emitting UV light from a 365 nm UV light source. The images were used to perform discriminant analyses (linear discriminant analysis, <i>k</i>-nearest neighbor analysis, and partial-least squares discriminant analysis) to identify and classify coupons on which bacteria could be cultured. The discriminant performances of specificity and sensitivity for <i>E. coli </i>(1–4 log CFU·cm<sup>−2</sup>) and <i>S. typhimurium </i>(1–6 log CFU·cm<sup>−2</sup>) were over 90% for most machine learning models used, and the highest performances were generally obtained from the <i>k</i>-nearest neighbor (<i>k</i>-NN) model. The application of the learning model to the hyperspectral image confirmed that the biofilm detection was well performed. This result indicates the possibility of rapidly inspecting biofilms using fluorescence hyperspectral images.
topic <i>E. coli</i>
<i>S</i> <i>. typhimuriu</i> <i>m</i>
biofilm
hyperspectral imaging
discriminant analysis
url https://www.mdpi.com/1424-8220/21/6/2213
work_keys_str_mv AT ahyeonglee detectingbacterialbiofilmsusingfluorescencehyperspectralimagingandvariousdiscriminantanalyses
AT saetbyeolpark detectingbacterialbiofilmsusingfluorescencehyperspectralimagingandvariousdiscriminantanalyses
AT jinyoungyoo detectingbacterialbiofilmsusingfluorescencehyperspectralimagingandvariousdiscriminantanalyses
AT jungsookkang detectingbacterialbiofilmsusingfluorescencehyperspectralimagingandvariousdiscriminantanalyses
AT jongguklim detectingbacterialbiofilmsusingfluorescencehyperspectralimagingandvariousdiscriminantanalyses
AT youngwookseo detectingbacterialbiofilmsusingfluorescencehyperspectralimagingandvariousdiscriminantanalyses
AT balgeumkim detectingbacterialbiofilmsusingfluorescencehyperspectralimagingandvariousdiscriminantanalyses
AT giyoungkim detectingbacterialbiofilmsusingfluorescencehyperspectralimagingandvariousdiscriminantanalyses
_version_ 1724207055896576000