Identification of Sphaeroma terebrans via morphology and the mitochondrial cytochrome c oxidase subunit I (COI) gene

Sphaeroma terebrans, a wood-boring isopoda, is distributed worldwide in tropical and subtropical mangroves. The taxonomy of S. terebrans is usually based on morphological characteristics, with its molecular identification still poorly understood. The number of teeth on the uropodal exopod and the le...

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Main Authors: Xiu-Feng LI, Chong HAN, Cai-Rong ZHONG, Jun-Qiu XU, Jian-Rong HUANG
Format: Article
Language:English
Published: Science Press, PR China 2016-09-01
Series:Zoological Research
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spelling doaj-ce39ce96d0d84836a9c32479c07560e82020-11-25T00:39:53ZengScience Press, PR ChinaZoological Research2095-81372095-81372016-09-0137530731210.13918/j.issn.2095-8137.2016.5.307Identification of Sphaeroma terebrans via morphology and the mitochondrial cytochrome c oxidase subunit I (COI) gene Xiu-Feng LI0Chong HAN1Cai-Rong ZHONG2Jun-Qiu XU3Jian-Rong HUANG4School of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, ChinaSchool of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, ChinaManagement Bureau of Dongzhaigang Mangrove Natural Reserve, Haikou 571129, ChinaSchool of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, ChinaSchool of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, ChinaSphaeroma terebrans, a wood-boring isopoda, is distributed worldwide in tropical and subtropical mangroves. The taxonomy of S. terebrans is usually based on morphological characteristics, with its molecular identification still poorly understood. The number of teeth on the uropodal exopod and the length of the propodus of the seventh pereopod are considered as the major morphological characteristics in S. terebrans, which can cause difficulty in regards to accurate identification. In this study, we identified S. terebrans via molecular and morphological data. Furthermore, the validity of the mitochondrial cytochrome c oxidase subunit I (COI) gene as a DNA barcode for the identification of genus Sphaeroma, including species S. terebrans, S. retrolaeve, and S. serratum, was examined. The mitochondrial COI gene sequences of all specimens were sequenced and analysed. The interspecific Kimura 2-parameter distances were higher than intraspecific distances and no intraspecific-interspecific distance overlaps were observed. In addition, genetic distance and nucleotide diversity (π) exhibited no differences within S. terebrans. Our results revealed that the mitochondrial COI gene can serve as a valid DNA barcode for the identification of S. terebrans. Furthermore, the number of teeth on the uropodal exopod and the length of the propodus of the seventh pereopod were found to be unreliable taxonomic characteristics for S. terebrans.Sphaeroma terebransDNA barcodeCOI geneMolecular identification
collection DOAJ
language English
format Article
sources DOAJ
author Xiu-Feng LI
Chong HAN
Cai-Rong ZHONG
Jun-Qiu XU
Jian-Rong HUANG
spellingShingle Xiu-Feng LI
Chong HAN
Cai-Rong ZHONG
Jun-Qiu XU
Jian-Rong HUANG
Identification of Sphaeroma terebrans via morphology and the mitochondrial cytochrome c oxidase subunit I (COI) gene
Zoological Research
Sphaeroma terebrans
DNA barcode
COI gene
Molecular identification
author_facet Xiu-Feng LI
Chong HAN
Cai-Rong ZHONG
Jun-Qiu XU
Jian-Rong HUANG
author_sort Xiu-Feng LI
title Identification of Sphaeroma terebrans via morphology and the mitochondrial cytochrome c oxidase subunit I (COI) gene
title_short Identification of Sphaeroma terebrans via morphology and the mitochondrial cytochrome c oxidase subunit I (COI) gene
title_full Identification of Sphaeroma terebrans via morphology and the mitochondrial cytochrome c oxidase subunit I (COI) gene
title_fullStr Identification of Sphaeroma terebrans via morphology and the mitochondrial cytochrome c oxidase subunit I (COI) gene
title_full_unstemmed Identification of Sphaeroma terebrans via morphology and the mitochondrial cytochrome c oxidase subunit I (COI) gene
title_sort identification of sphaeroma terebrans via morphology and the mitochondrial cytochrome c oxidase subunit i (coi) gene
publisher Science Press, PR China
series Zoological Research
issn 2095-8137
2095-8137
publishDate 2016-09-01
description Sphaeroma terebrans, a wood-boring isopoda, is distributed worldwide in tropical and subtropical mangroves. The taxonomy of S. terebrans is usually based on morphological characteristics, with its molecular identification still poorly understood. The number of teeth on the uropodal exopod and the length of the propodus of the seventh pereopod are considered as the major morphological characteristics in S. terebrans, which can cause difficulty in regards to accurate identification. In this study, we identified S. terebrans via molecular and morphological data. Furthermore, the validity of the mitochondrial cytochrome c oxidase subunit I (COI) gene as a DNA barcode for the identification of genus Sphaeroma, including species S. terebrans, S. retrolaeve, and S. serratum, was examined. The mitochondrial COI gene sequences of all specimens were sequenced and analysed. The interspecific Kimura 2-parameter distances were higher than intraspecific distances and no intraspecific-interspecific distance overlaps were observed. In addition, genetic distance and nucleotide diversity (π) exhibited no differences within S. terebrans. Our results revealed that the mitochondrial COI gene can serve as a valid DNA barcode for the identification of S. terebrans. Furthermore, the number of teeth on the uropodal exopod and the length of the propodus of the seventh pereopod were found to be unreliable taxonomic characteristics for S. terebrans.
topic Sphaeroma terebrans
DNA barcode
COI gene
Molecular identification
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