Two Complete Mitochondrial Genomes of Mileewinae (Hemiptera: Cicadellidae) and a Phylogenetic Analysis

More studies are using mitochondrial genomes of insects to explore the sequence variability, evolutionary traits, monophyly of groups and phylogenetic relationships. Controversies remain on the classification of the Mileewinae and the phylogenetic relationships between Mileewinae and other subfamili...

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Main Authors: Tinghao Yu, Yalin Zhang
Format: Article
Language:English
Published: MDPI AG 2021-07-01
Series:Insects
Subjects:
Online Access:https://www.mdpi.com/2075-4450/12/8/668
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spelling doaj-d05c8e1e154b4c5ca399eb0c0286e8942021-08-26T13:54:26ZengMDPI AGInsects2075-44502021-07-011266866810.3390/insects12080668Two Complete Mitochondrial Genomes of Mileewinae (Hemiptera: Cicadellidae) and a Phylogenetic AnalysisTinghao Yu0Yalin Zhang1Key Laboratory of Plant Protection Resources and Pest Management, Ministry of Education, Entomological Museum, College of Plant Protection, Northwest A&F University, Yangling, Xianyang 712100, ChinaKey Laboratory of Plant Protection Resources and Pest Management, Ministry of Education, Entomological Museum, College of Plant Protection, Northwest A&F University, Yangling, Xianyang 712100, ChinaMore studies are using mitochondrial genomes of insects to explore the sequence variability, evolutionary traits, monophyly of groups and phylogenetic relationships. Controversies remain on the classification of the Mileewinae and the phylogenetic relationships between Mileewinae and other subfamilies remain ambiguous. In this study, we present two newly completed mitogenomes of Mileewinae (<i>Mileewa rufivena</i> Cai and Kuoh 1997 and <i>Ujna puerana</i> Yang and Meng 2010) and conduct comparative mitogenomic analyses based on several different factors. These species have quite similar features, including their nucleotide content, codon usage of protein genes and the secondary structure of tRNA. Gene arrangement is identical and conserved, the same as the putative ancestral pattern of insects. All protein-coding genes of <i>U. puerana</i> began with the start codon ATN, while 5 <i>Mileewa</i> species had the abnormal initiation codon TTG in <i>ND5</i> and <i>ATP8</i>. Moreover, <i>M. rufivena</i> had an intergenic spacer of 17 bp that could not be found in other mileewine species. Phylogenetic analysis based on three datasets (PCG123, PCG12 and AA) with two methods (maximum likelihood and Bayesian inference) recovered the Mileewinae as a monophyletic group with strong support values. All results in our study indicate that Mileewinae has a closer phylogenetic relationship to Typhlocybinae compared to Cicadellinae. Additionally, six species within Mileewini revealed the relationship (<i>U. puerana</i> + (<i>M. ponta</i> + (<i>M. rufivena</i> + <i>M. alara</i>) + (<i>M. albovittata</i> + <i>M. margheritae</i>))) in most of our phylogenetic trees. These results contribute to the study of the taxonomic status and phylogenetic relationships of Mileewinae.https://www.mdpi.com/2075-4450/12/8/668Auchenorrhynchaleafhoppermitogenomephylogeny
collection DOAJ
language English
format Article
sources DOAJ
author Tinghao Yu
Yalin Zhang
spellingShingle Tinghao Yu
Yalin Zhang
Two Complete Mitochondrial Genomes of Mileewinae (Hemiptera: Cicadellidae) and a Phylogenetic Analysis
Insects
Auchenorrhyncha
leafhopper
mitogenome
phylogeny
author_facet Tinghao Yu
Yalin Zhang
author_sort Tinghao Yu
title Two Complete Mitochondrial Genomes of Mileewinae (Hemiptera: Cicadellidae) and a Phylogenetic Analysis
title_short Two Complete Mitochondrial Genomes of Mileewinae (Hemiptera: Cicadellidae) and a Phylogenetic Analysis
title_full Two Complete Mitochondrial Genomes of Mileewinae (Hemiptera: Cicadellidae) and a Phylogenetic Analysis
title_fullStr Two Complete Mitochondrial Genomes of Mileewinae (Hemiptera: Cicadellidae) and a Phylogenetic Analysis
title_full_unstemmed Two Complete Mitochondrial Genomes of Mileewinae (Hemiptera: Cicadellidae) and a Phylogenetic Analysis
title_sort two complete mitochondrial genomes of mileewinae (hemiptera: cicadellidae) and a phylogenetic analysis
publisher MDPI AG
series Insects
issn 2075-4450
publishDate 2021-07-01
description More studies are using mitochondrial genomes of insects to explore the sequence variability, evolutionary traits, monophyly of groups and phylogenetic relationships. Controversies remain on the classification of the Mileewinae and the phylogenetic relationships between Mileewinae and other subfamilies remain ambiguous. In this study, we present two newly completed mitogenomes of Mileewinae (<i>Mileewa rufivena</i> Cai and Kuoh 1997 and <i>Ujna puerana</i> Yang and Meng 2010) and conduct comparative mitogenomic analyses based on several different factors. These species have quite similar features, including their nucleotide content, codon usage of protein genes and the secondary structure of tRNA. Gene arrangement is identical and conserved, the same as the putative ancestral pattern of insects. All protein-coding genes of <i>U. puerana</i> began with the start codon ATN, while 5 <i>Mileewa</i> species had the abnormal initiation codon TTG in <i>ND5</i> and <i>ATP8</i>. Moreover, <i>M. rufivena</i> had an intergenic spacer of 17 bp that could not be found in other mileewine species. Phylogenetic analysis based on three datasets (PCG123, PCG12 and AA) with two methods (maximum likelihood and Bayesian inference) recovered the Mileewinae as a monophyletic group with strong support values. All results in our study indicate that Mileewinae has a closer phylogenetic relationship to Typhlocybinae compared to Cicadellinae. Additionally, six species within Mileewini revealed the relationship (<i>U. puerana</i> + (<i>M. ponta</i> + (<i>M. rufivena</i> + <i>M. alara</i>) + (<i>M. albovittata</i> + <i>M. margheritae</i>))) in most of our phylogenetic trees. These results contribute to the study of the taxonomic status and phylogenetic relationships of Mileewinae.
topic Auchenorrhyncha
leafhopper
mitogenome
phylogeny
url https://www.mdpi.com/2075-4450/12/8/668
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