The effect of listening to music on human transcriptome

Although brain imaging studies have demonstrated that listening to music alters human brain structure and function, the molecular mechanisms mediating those effects remain unknown. With the advent of genomics and bioinformatics approaches, these effects of music can now be studied in a more detailed...

Full description

Bibliographic Details
Main Authors: Chakravarthi Kanduri, Pirre Raijas, Minna Ahvenainen, Anju K. Philips, Liisa Ukkola-Vuoti, Harri Lähdesmäki, Irma Järvelä
Format: Article
Language:English
Published: PeerJ Inc. 2015-03-01
Series:PeerJ
Subjects:
RNA
Online Access:https://peerj.com/articles/830.pdf
id doaj-d593c626c7ef4aa1bca42d63d3f0a483
record_format Article
spelling doaj-d593c626c7ef4aa1bca42d63d3f0a4832020-11-24T22:39:51ZengPeerJ Inc.PeerJ2167-83592015-03-013e83010.7717/peerj.830830The effect of listening to music on human transcriptomeChakravarthi Kanduri0Pirre Raijas1Minna Ahvenainen2Anju K. Philips3Liisa Ukkola-Vuoti4Harri Lähdesmäki5Irma Järvelä6Department of Medical Genetics, University of Helsinki, FinlandDocMus Department, University of the Arts Helsinki, Helsinki, FinlandDepartment of Medical Genetics, University of Helsinki, FinlandDepartment of Medical Genetics, University of Helsinki, FinlandDepartment of Medical Genetics, University of Helsinki, FinlandDepartment of Information and Computer Science, Aalto University, AALTO, FinlandDepartment of Medical Genetics, University of Helsinki, FinlandAlthough brain imaging studies have demonstrated that listening to music alters human brain structure and function, the molecular mechanisms mediating those effects remain unknown. With the advent of genomics and bioinformatics approaches, these effects of music can now be studied in a more detailed fashion. To verify whether listening to classical music has any effect on human transcriptome, we performed genome-wide transcriptional profiling from the peripheral blood of participants after listening to classical music (n = 48), and after a control study without music exposure (n = 15). As musical experience is known to influence the responses to music, we compared the transcriptional responses of musically experienced and inexperienced participants separately with those of the controls. Comparisons were made based on two subphenotypes of musical experience: musical aptitude and music education. In musically experiencd participants, we observed the differential expression of 45 genes (27 up- and 18 down-regulated) and 97 genes (75 up- and 22 down-regulated) respectively based on subphenotype comparisons (rank product non-parametric statistics, pfp 0.05, >1.2-fold change over time across conditions). Gene ontological overrepresentation analysis (hypergeometric test, FDR < 0.05) revealed that the up-regulated genes are primarily known to be involved in the secretion and transport of dopamine, neuron projection, protein sumoylation, long-term potentiation and dephosphorylation. Down-regulated genes are known to be involved in ATP synthase-coupled proton transport, cytolysis, and positive regulation of caspase, peptidase and endopeptidase activities. One of the most up-regulated genes, alpha-synuclein (SNCA), is located in the best linkage region of musical aptitude on chromosome 4q22.1 and is regulated by GATA2, which is known to be associated with musical aptitude. Several genes reported to regulate song perception and production in songbirds displayed altered activities, suggesting a possible evolutionary conservation of sound perception between species. We observed no significant findings in musically inexperienced participants.https://peerj.com/articles/830.pdfMusicRNAGene expression profilingDopamineLong-term potentiationGenomics
collection DOAJ
language English
format Article
sources DOAJ
author Chakravarthi Kanduri
Pirre Raijas
Minna Ahvenainen
Anju K. Philips
Liisa Ukkola-Vuoti
Harri Lähdesmäki
Irma Järvelä
spellingShingle Chakravarthi Kanduri
Pirre Raijas
Minna Ahvenainen
Anju K. Philips
Liisa Ukkola-Vuoti
Harri Lähdesmäki
Irma Järvelä
The effect of listening to music on human transcriptome
PeerJ
Music
RNA
Gene expression profiling
Dopamine
Long-term potentiation
Genomics
author_facet Chakravarthi Kanduri
Pirre Raijas
Minna Ahvenainen
Anju K. Philips
Liisa Ukkola-Vuoti
Harri Lähdesmäki
Irma Järvelä
author_sort Chakravarthi Kanduri
title The effect of listening to music on human transcriptome
title_short The effect of listening to music on human transcriptome
title_full The effect of listening to music on human transcriptome
title_fullStr The effect of listening to music on human transcriptome
title_full_unstemmed The effect of listening to music on human transcriptome
title_sort effect of listening to music on human transcriptome
publisher PeerJ Inc.
series PeerJ
issn 2167-8359
publishDate 2015-03-01
description Although brain imaging studies have demonstrated that listening to music alters human brain structure and function, the molecular mechanisms mediating those effects remain unknown. With the advent of genomics and bioinformatics approaches, these effects of music can now be studied in a more detailed fashion. To verify whether listening to classical music has any effect on human transcriptome, we performed genome-wide transcriptional profiling from the peripheral blood of participants after listening to classical music (n = 48), and after a control study without music exposure (n = 15). As musical experience is known to influence the responses to music, we compared the transcriptional responses of musically experienced and inexperienced participants separately with those of the controls. Comparisons were made based on two subphenotypes of musical experience: musical aptitude and music education. In musically experiencd participants, we observed the differential expression of 45 genes (27 up- and 18 down-regulated) and 97 genes (75 up- and 22 down-regulated) respectively based on subphenotype comparisons (rank product non-parametric statistics, pfp 0.05, >1.2-fold change over time across conditions). Gene ontological overrepresentation analysis (hypergeometric test, FDR < 0.05) revealed that the up-regulated genes are primarily known to be involved in the secretion and transport of dopamine, neuron projection, protein sumoylation, long-term potentiation and dephosphorylation. Down-regulated genes are known to be involved in ATP synthase-coupled proton transport, cytolysis, and positive regulation of caspase, peptidase and endopeptidase activities. One of the most up-regulated genes, alpha-synuclein (SNCA), is located in the best linkage region of musical aptitude on chromosome 4q22.1 and is regulated by GATA2, which is known to be associated with musical aptitude. Several genes reported to regulate song perception and production in songbirds displayed altered activities, suggesting a possible evolutionary conservation of sound perception between species. We observed no significant findings in musically inexperienced participants.
topic Music
RNA
Gene expression profiling
Dopamine
Long-term potentiation
Genomics
url https://peerj.com/articles/830.pdf
work_keys_str_mv AT chakravarthikanduri theeffectoflisteningtomusiconhumantranscriptome
AT pirreraijas theeffectoflisteningtomusiconhumantranscriptome
AT minnaahvenainen theeffectoflisteningtomusiconhumantranscriptome
AT anjukphilips theeffectoflisteningtomusiconhumantranscriptome
AT liisaukkolavuoti theeffectoflisteningtomusiconhumantranscriptome
AT harrilahdesmaki theeffectoflisteningtomusiconhumantranscriptome
AT irmajarvela theeffectoflisteningtomusiconhumantranscriptome
AT chakravarthikanduri effectoflisteningtomusiconhumantranscriptome
AT pirreraijas effectoflisteningtomusiconhumantranscriptome
AT minnaahvenainen effectoflisteningtomusiconhumantranscriptome
AT anjukphilips effectoflisteningtomusiconhumantranscriptome
AT liisaukkolavuoti effectoflisteningtomusiconhumantranscriptome
AT harrilahdesmaki effectoflisteningtomusiconhumantranscriptome
AT irmajarvela effectoflisteningtomusiconhumantranscriptome
_version_ 1725707226578944000