Identification of bacterial laccase cueO mutation from the metagenome of chemical plant sludge

Abstract Background The metagenome contains plenty of genetic resources and can be used to search for the novel gene or mutant. Results In this study, the bacterial laccase gene (cueO) with single or multiple mutations was directly cloned based on the metagenome of a chemical plant sludge. An intere...

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Main Authors: Qingxia Yue, Yunxia Yang, Jintong Zhao, Lijie Zhang, Li Xu, Xiaoyu Chu, Xiaoqing Liu, Jian Tian, Ningfeng Wu
Format: Article
Language:English
Published: SpringerOpen 2017-11-01
Series:Bioresources and Bioprocessing
Subjects:
Online Access:http://link.springer.com/article/10.1186/s40643-017-0178-0
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spelling doaj-d62a4c1c863f49558df86e433ff9da5c2020-11-24T22:18:06ZengSpringerOpenBioresources and Bioprocessing2197-43652017-11-01411810.1186/s40643-017-0178-0Identification of bacterial laccase cueO mutation from the metagenome of chemical plant sludgeQingxia Yue0Yunxia Yang1Jintong Zhao2Lijie Zhang3Li Xu4Xiaoyu Chu5Xiaoqing Liu6Jian Tian7Ningfeng Wu8College of Life Science and Technology, Jinan UniversityInstitute of Quality Standards and Testing Technology for Agro-products, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesEnvironmental Protection Research Institute of Light IndustryBiotechnology Research Institute, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesBiotechnology Research Institute, Chinese Academy of Agricultural SciencesAbstract Background The metagenome contains plenty of genetic resources and can be used to search for the novel gene or mutant. Results In this study, the bacterial laccase gene (cueO) with single or multiple mutations was directly cloned based on the metagenome of a chemical plant sludge. An interesting mutation (G276R) was identified from those cloned mutants. The other mutants (G276N, G276Y, and G276K) with improved catalytic efficiency were identified by the saturation mutagenesis on residue G276. The optimal temperature for wild-type CueO enzyme activity was about 70 °C, compared to 60 °C, 50 °C, 50 °C, and 30 °C for the G276R, G276N, G276Y, and G276K mutant enzymes, respectively. The catalytic efficiency (k cat/K m) with 8 mmol Cu2+ of the G276R, G276N, G276Y, and G276K mutants was 1.2-, 2.7-, 1.3-, and 2.7-fold, respectively, compared to the wild-type enzyme. In addition, the mutants G276R, G276N, G276Y, and G276K oxidized the carcinogen benzo[α]pyrene more efficiently compared to the wild-type enzyme. Conclusion All of the results indicate that G276 of CueO plays an important role in enzyme activity, and the useful mutants can be identified based on the metagenome.http://link.springer.com/article/10.1186/s40643-017-0178-0Bacterial laccaseCueOG276KMutationMetagenome
collection DOAJ
language English
format Article
sources DOAJ
author Qingxia Yue
Yunxia Yang
Jintong Zhao
Lijie Zhang
Li Xu
Xiaoyu Chu
Xiaoqing Liu
Jian Tian
Ningfeng Wu
spellingShingle Qingxia Yue
Yunxia Yang
Jintong Zhao
Lijie Zhang
Li Xu
Xiaoyu Chu
Xiaoqing Liu
Jian Tian
Ningfeng Wu
Identification of bacterial laccase cueO mutation from the metagenome of chemical plant sludge
Bioresources and Bioprocessing
Bacterial laccase
CueO
G276K
Mutation
Metagenome
author_facet Qingxia Yue
Yunxia Yang
Jintong Zhao
Lijie Zhang
Li Xu
Xiaoyu Chu
Xiaoqing Liu
Jian Tian
Ningfeng Wu
author_sort Qingxia Yue
title Identification of bacterial laccase cueO mutation from the metagenome of chemical plant sludge
title_short Identification of bacterial laccase cueO mutation from the metagenome of chemical plant sludge
title_full Identification of bacterial laccase cueO mutation from the metagenome of chemical plant sludge
title_fullStr Identification of bacterial laccase cueO mutation from the metagenome of chemical plant sludge
title_full_unstemmed Identification of bacterial laccase cueO mutation from the metagenome of chemical plant sludge
title_sort identification of bacterial laccase cueo mutation from the metagenome of chemical plant sludge
publisher SpringerOpen
series Bioresources and Bioprocessing
issn 2197-4365
publishDate 2017-11-01
description Abstract Background The metagenome contains plenty of genetic resources and can be used to search for the novel gene or mutant. Results In this study, the bacterial laccase gene (cueO) with single or multiple mutations was directly cloned based on the metagenome of a chemical plant sludge. An interesting mutation (G276R) was identified from those cloned mutants. The other mutants (G276N, G276Y, and G276K) with improved catalytic efficiency were identified by the saturation mutagenesis on residue G276. The optimal temperature for wild-type CueO enzyme activity was about 70 °C, compared to 60 °C, 50 °C, 50 °C, and 30 °C for the G276R, G276N, G276Y, and G276K mutant enzymes, respectively. The catalytic efficiency (k cat/K m) with 8 mmol Cu2+ of the G276R, G276N, G276Y, and G276K mutants was 1.2-, 2.7-, 1.3-, and 2.7-fold, respectively, compared to the wild-type enzyme. In addition, the mutants G276R, G276N, G276Y, and G276K oxidized the carcinogen benzo[α]pyrene more efficiently compared to the wild-type enzyme. Conclusion All of the results indicate that G276 of CueO plays an important role in enzyme activity, and the useful mutants can be identified based on the metagenome.
topic Bacterial laccase
CueO
G276K
Mutation
Metagenome
url http://link.springer.com/article/10.1186/s40643-017-0178-0
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