Dataset for transcriptional response of barley (Hordeum vulgare) exposed to drought and subsequent re-watering

Barley (Hordeum vulgare) is an economically important species, which can be cultivated in environmentally adverse conditions due to its higher tolerance in contrast to other cereal crops. The draft of H. vulgare genome is available already for couple of years; however its functional annotation is st...

Full description

Bibliographic Details
Main Authors: Filip Kokáš, Petr Vojta, Petr Galuszka
Format: Article
Language:English
Published: Elsevier 2016-09-01
Series:Data in Brief
Online Access:http://www.sciencedirect.com/science/article/pii/S2352340916303390
id doaj-d62c9b7923fb41f18412af5c7f4e8680
record_format Article
spelling doaj-d62c9b7923fb41f18412af5c7f4e86802020-11-24T21:46:43ZengElsevierData in Brief2352-34092016-09-018334341Dataset for transcriptional response of barley (Hordeum vulgare) exposed to drought and subsequent re-wateringFilip Kokáš0Petr Vojta1Petr Galuszka2Department of Molecular Biology, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University in Olomouc, Czech RepublicDepartment of Molecular Biology, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University in Olomouc, Czech RepublicCorresponding author.; Department of Molecular Biology, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University in Olomouc, Czech RepublicBarley (Hordeum vulgare) is an economically important species, which can be cultivated in environmentally adverse conditions due to its higher tolerance in contrast to other cereal crops. The draft of H. vulgare genome is available already for couple of years; however its functional annotation is still incomplete. All available databases were searched to expand current annotation. The improved annotation was used to describe processes and genes regulated in transgenic lines showing higher tolerance to drought in our associated article, doi:10.1016/j.nbt.2016.01.010 (Vojta et al., 2016) [1]. Here we present whole transcriptome response, using extended annotation, to severe drought stress and subsequent re-watering in wild-type barley plants in stem elongation phase of growth. Up- and down-regulated genes fall into distinct GO categories and these enriched by stress and revitalization are highlighted. Transcriptomic data were evaluated separately for root and aerial tissues. Keywords: Barley, Drought stress, Genome annotation, Re-watering, Transcriptomicshttp://www.sciencedirect.com/science/article/pii/S2352340916303390
collection DOAJ
language English
format Article
sources DOAJ
author Filip Kokáš
Petr Vojta
Petr Galuszka
spellingShingle Filip Kokáš
Petr Vojta
Petr Galuszka
Dataset for transcriptional response of barley (Hordeum vulgare) exposed to drought and subsequent re-watering
Data in Brief
author_facet Filip Kokáš
Petr Vojta
Petr Galuszka
author_sort Filip Kokáš
title Dataset for transcriptional response of barley (Hordeum vulgare) exposed to drought and subsequent re-watering
title_short Dataset for transcriptional response of barley (Hordeum vulgare) exposed to drought and subsequent re-watering
title_full Dataset for transcriptional response of barley (Hordeum vulgare) exposed to drought and subsequent re-watering
title_fullStr Dataset for transcriptional response of barley (Hordeum vulgare) exposed to drought and subsequent re-watering
title_full_unstemmed Dataset for transcriptional response of barley (Hordeum vulgare) exposed to drought and subsequent re-watering
title_sort dataset for transcriptional response of barley (hordeum vulgare) exposed to drought and subsequent re-watering
publisher Elsevier
series Data in Brief
issn 2352-3409
publishDate 2016-09-01
description Barley (Hordeum vulgare) is an economically important species, which can be cultivated in environmentally adverse conditions due to its higher tolerance in contrast to other cereal crops. The draft of H. vulgare genome is available already for couple of years; however its functional annotation is still incomplete. All available databases were searched to expand current annotation. The improved annotation was used to describe processes and genes regulated in transgenic lines showing higher tolerance to drought in our associated article, doi:10.1016/j.nbt.2016.01.010 (Vojta et al., 2016) [1]. Here we present whole transcriptome response, using extended annotation, to severe drought stress and subsequent re-watering in wild-type barley plants in stem elongation phase of growth. Up- and down-regulated genes fall into distinct GO categories and these enriched by stress and revitalization are highlighted. Transcriptomic data were evaluated separately for root and aerial tissues. Keywords: Barley, Drought stress, Genome annotation, Re-watering, Transcriptomics
url http://www.sciencedirect.com/science/article/pii/S2352340916303390
work_keys_str_mv AT filipkokas datasetfortranscriptionalresponseofbarleyhordeumvulgareexposedtodroughtandsubsequentrewatering
AT petrvojta datasetfortranscriptionalresponseofbarleyhordeumvulgareexposedtodroughtandsubsequentrewatering
AT petrgaluszka datasetfortranscriptionalresponseofbarleyhordeumvulgareexposedtodroughtandsubsequentrewatering
_version_ 1725900450958409728