LC-MS data for metabolomics analysis of Garcinia mangostana L. seed germination

Metabolic regulation is important during seed germination for the establishment of seedling. The germination strategy of mangosteen (Garcinia mangostana L.) seed is thought to be unique due to its recalcitrant characteristic (sensitive to coldness and drying). To investigate the metabolic changes du...

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Main Authors: Othman Mazlan, Wan Mohd Aizat, Nor Shahida Aziz Zuddin, Syarul Nataqain Baharum, Normah Mohd Noor
Format: Article
Language:English
Published: Elsevier 2018-12-01
Series:Data in Brief
Online Access:http://www.sciencedirect.com/science/article/pii/S2352340918314653
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spelling doaj-d7eef150398f452d8a696cfa073fa98c2020-11-24T21:47:52ZengElsevierData in Brief2352-34092018-12-012122212223LC-MS data for metabolomics analysis of Garcinia mangostana L. seed germinationOthman Mazlan0Wan Mohd Aizat1Nor Shahida Aziz Zuddin2Syarul Nataqain Baharum3Normah Mohd Noor4Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 UKM Bangi, Selangor, MalaysiaCorresponding authors.; Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 UKM Bangi, Selangor, MalaysiaInstitute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 UKM Bangi, Selangor, MalaysiaInstitute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 UKM Bangi, Selangor, MalaysiaCorresponding authors.; Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 UKM Bangi, Selangor, MalaysiaMetabolic regulation is important during seed germination for the establishment of seedling. The germination strategy of mangosteen (Garcinia mangostana L.) seed is thought to be unique due to its recalcitrant characteristic (sensitive to coldness and drying). To investigate the metabolic changes during seed germination, we performed metabolomics analysis on germinating mangosteen seed sown after zero, one, three, five, seven and nine days. Sampled mangosteen seeds were subjected to methanol extraction prior analysis using Liquid Chromatography-Time of Flight-Mass Spectrometry (LC-TOF-MS). MS data were further analyzed using ProfileAnalysis (version 2.1). This is one of the earliest reports in metabolite identification and profiling of mangosteen seed at different germination stages. This data article refers to the article entitled “Metabolite profiling of mangosteen seed germination highlights metabolic changes related to carbon utilization and seed protection” (Mazlan et al., 2019) [1]. Keywords: Garcinia mangostana L., Recalcitrant seed, Germination, LC-MS, Metabolomicshttp://www.sciencedirect.com/science/article/pii/S2352340918314653
collection DOAJ
language English
format Article
sources DOAJ
author Othman Mazlan
Wan Mohd Aizat
Nor Shahida Aziz Zuddin
Syarul Nataqain Baharum
Normah Mohd Noor
spellingShingle Othman Mazlan
Wan Mohd Aizat
Nor Shahida Aziz Zuddin
Syarul Nataqain Baharum
Normah Mohd Noor
LC-MS data for metabolomics analysis of Garcinia mangostana L. seed germination
Data in Brief
author_facet Othman Mazlan
Wan Mohd Aizat
Nor Shahida Aziz Zuddin
Syarul Nataqain Baharum
Normah Mohd Noor
author_sort Othman Mazlan
title LC-MS data for metabolomics analysis of Garcinia mangostana L. seed germination
title_short LC-MS data for metabolomics analysis of Garcinia mangostana L. seed germination
title_full LC-MS data for metabolomics analysis of Garcinia mangostana L. seed germination
title_fullStr LC-MS data for metabolomics analysis of Garcinia mangostana L. seed germination
title_full_unstemmed LC-MS data for metabolomics analysis of Garcinia mangostana L. seed germination
title_sort lc-ms data for metabolomics analysis of garcinia mangostana l. seed germination
publisher Elsevier
series Data in Brief
issn 2352-3409
publishDate 2018-12-01
description Metabolic regulation is important during seed germination for the establishment of seedling. The germination strategy of mangosteen (Garcinia mangostana L.) seed is thought to be unique due to its recalcitrant characteristic (sensitive to coldness and drying). To investigate the metabolic changes during seed germination, we performed metabolomics analysis on germinating mangosteen seed sown after zero, one, three, five, seven and nine days. Sampled mangosteen seeds were subjected to methanol extraction prior analysis using Liquid Chromatography-Time of Flight-Mass Spectrometry (LC-TOF-MS). MS data were further analyzed using ProfileAnalysis (version 2.1). This is one of the earliest reports in metabolite identification and profiling of mangosteen seed at different germination stages. This data article refers to the article entitled “Metabolite profiling of mangosteen seed germination highlights metabolic changes related to carbon utilization and seed protection” (Mazlan et al., 2019) [1]. Keywords: Garcinia mangostana L., Recalcitrant seed, Germination, LC-MS, Metabolomics
url http://www.sciencedirect.com/science/article/pii/S2352340918314653
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