An Improved Retinal Vessel Segmentation Framework Using Frangi Filter Coupled With the Probabilistic Patch Based Denoiser

Vessel segmentation has come a long way in terms of matching the experts at detection accuracy, yet there is potential for further improvement. In this regard, the accurate detection of vessels is generally more challenging due to the high variations in vessel contrast, width, and the observed noise...

Full description

Bibliographic Details
Main Authors: Ahsan Khawaja, Tariq M. Khan, Khuram Naveed, Syed Saud Naqvi, Naveed Ur Rehman, Syed Junaid Nawaz
Format: Article
Language:English
Published: IEEE 2019-01-01
Series:IEEE Access
Subjects:
Online Access:https://ieeexplore.ieee.org/document/8897549/
id doaj-d9c693d189f84f9eb416b6ea4ece989f
record_format Article
spelling doaj-d9c693d189f84f9eb416b6ea4ece989f2021-03-30T00:53:12ZengIEEEIEEE Access2169-35362019-01-01716434416436110.1109/ACCESS.2019.29532598897549An Improved Retinal Vessel Segmentation Framework Using Frangi Filter Coupled With the Probabilistic Patch Based DenoiserAhsan Khawaja0https://orcid.org/0000-0002-1344-1513Tariq M. Khan1https://orcid.org/0000-0002-7477-1591Khuram Naveed2https://orcid.org/0000-0001-8286-6139Syed Saud Naqvi3https://orcid.org/0000-0002-6335-3538Naveed Ur Rehman4https://orcid.org/0000-0002-3700-5839Syed Junaid Nawaz5https://orcid.org/0000-0001-5448-2170Department of Electrical and Computer Engineering, COMSATS University Islamabad (CUI), Islamabad, PakistanDepartment of Electrical and Computer Engineering, COMSATS University Islamabad (CUI), Islamabad, PakistanDepartment of Electrical and Computer Engineering, COMSATS University Islamabad (CUI), Islamabad, PakistanDepartment of Electrical and Computer Engineering, COMSATS University Islamabad (CUI), Islamabad, PakistanDepartment of Electrical and Computer Engineering, COMSATS University Islamabad (CUI), Islamabad, PakistanDepartment of Electrical and Computer Engineering, COMSATS University Islamabad (CUI), Islamabad, PakistanVessel segmentation has come a long way in terms of matching the experts at detection accuracy, yet there is potential for further improvement. In this regard, the accurate detection of vessels is generally more challenging due to the high variations in vessel contrast, width, and the observed noise level. Most vessel segmentation strategies utilize contrast enhancement as a preprocessing step, which has an inherent tendency to aggravate the noise and therefore, impede accurate vessel detection. To alleviate this problem, we propose to use the state-of-the-art Probabilistic Patch-Based (PPB) denoiser within the framework of an unsupervised retinal vessel segmentation strategy based on the Frangi filter. The PPB denoiser helps preserve vascular structure while effectively dealing with the amplified noise. Also, the modified Frangi filter is evaluated separately for tiny and large vessels, followed by individual segmentation and linear recombination of the binarized outputs. This way, the performance of the modified Frangi filter is significantly enhanced. The performance evaluation of the proposed method is evaluated on two recognized open-access datasets, viz: DRIVE and STARE. The proposed strategy yields competitive results for both preprocessing modalities, i.e., Contrast Limited Adaptive Histogram Equalization (CLAHE) and Generalized Linear Model (GLM). The performance observed for CLAHE over DRIVE and STARE datasets is (Sn = 0.8027, Acc = 0.9561) and (Sn = 0.798, Acc = 0.9561), respectively. For GLM, it is observed to be (Sn = 0.7907, Acc = 0.9603) and (Sn = 0.7860, Acc = 0.9583) over DRIVE and STARE datasets, respectively. Furthermore, based on the conducted comparative study, it is established that the proposed method outperforms various notable vessel segmentation methods available in the existing literature.https://ieeexplore.ieee.org/document/8897549/Image denoisingimage segmentationmodified Frangi filterprobabilistic patch-based denoiserretinal vessels
collection DOAJ
language English
format Article
sources DOAJ
author Ahsan Khawaja
Tariq M. Khan
Khuram Naveed
Syed Saud Naqvi
Naveed Ur Rehman
Syed Junaid Nawaz
spellingShingle Ahsan Khawaja
Tariq M. Khan
Khuram Naveed
Syed Saud Naqvi
Naveed Ur Rehman
Syed Junaid Nawaz
An Improved Retinal Vessel Segmentation Framework Using Frangi Filter Coupled With the Probabilistic Patch Based Denoiser
IEEE Access
Image denoising
image segmentation
modified Frangi filter
probabilistic patch-based denoiser
retinal vessels
author_facet Ahsan Khawaja
Tariq M. Khan
Khuram Naveed
Syed Saud Naqvi
Naveed Ur Rehman
Syed Junaid Nawaz
author_sort Ahsan Khawaja
title An Improved Retinal Vessel Segmentation Framework Using Frangi Filter Coupled With the Probabilistic Patch Based Denoiser
title_short An Improved Retinal Vessel Segmentation Framework Using Frangi Filter Coupled With the Probabilistic Patch Based Denoiser
title_full An Improved Retinal Vessel Segmentation Framework Using Frangi Filter Coupled With the Probabilistic Patch Based Denoiser
title_fullStr An Improved Retinal Vessel Segmentation Framework Using Frangi Filter Coupled With the Probabilistic Patch Based Denoiser
title_full_unstemmed An Improved Retinal Vessel Segmentation Framework Using Frangi Filter Coupled With the Probabilistic Patch Based Denoiser
title_sort improved retinal vessel segmentation framework using frangi filter coupled with the probabilistic patch based denoiser
publisher IEEE
series IEEE Access
issn 2169-3536
publishDate 2019-01-01
description Vessel segmentation has come a long way in terms of matching the experts at detection accuracy, yet there is potential for further improvement. In this regard, the accurate detection of vessels is generally more challenging due to the high variations in vessel contrast, width, and the observed noise level. Most vessel segmentation strategies utilize contrast enhancement as a preprocessing step, which has an inherent tendency to aggravate the noise and therefore, impede accurate vessel detection. To alleviate this problem, we propose to use the state-of-the-art Probabilistic Patch-Based (PPB) denoiser within the framework of an unsupervised retinal vessel segmentation strategy based on the Frangi filter. The PPB denoiser helps preserve vascular structure while effectively dealing with the amplified noise. Also, the modified Frangi filter is evaluated separately for tiny and large vessels, followed by individual segmentation and linear recombination of the binarized outputs. This way, the performance of the modified Frangi filter is significantly enhanced. The performance evaluation of the proposed method is evaluated on two recognized open-access datasets, viz: DRIVE and STARE. The proposed strategy yields competitive results for both preprocessing modalities, i.e., Contrast Limited Adaptive Histogram Equalization (CLAHE) and Generalized Linear Model (GLM). The performance observed for CLAHE over DRIVE and STARE datasets is (Sn = 0.8027, Acc = 0.9561) and (Sn = 0.798, Acc = 0.9561), respectively. For GLM, it is observed to be (Sn = 0.7907, Acc = 0.9603) and (Sn = 0.7860, Acc = 0.9583) over DRIVE and STARE datasets, respectively. Furthermore, based on the conducted comparative study, it is established that the proposed method outperforms various notable vessel segmentation methods available in the existing literature.
topic Image denoising
image segmentation
modified Frangi filter
probabilistic patch-based denoiser
retinal vessels
url https://ieeexplore.ieee.org/document/8897549/
work_keys_str_mv AT ahsankhawaja animprovedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
AT tariqmkhan animprovedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
AT khuramnaveed animprovedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
AT syedsaudnaqvi animprovedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
AT naveedurrehman animprovedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
AT syedjunaidnawaz animprovedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
AT ahsankhawaja improvedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
AT tariqmkhan improvedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
AT khuramnaveed improvedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
AT syedsaudnaqvi improvedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
AT naveedurrehman improvedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
AT syedjunaidnawaz improvedretinalvesselsegmentationframeworkusingfrangifiltercoupledwiththeprobabilisticpatchbaseddenoiser
_version_ 1724187750026969088