Methylome Patterns of Cattle Adaptation to Heat Stress

Heat stress has a detrimental impact on cattle health, welfare and productivity by affecting gene expression, metabolism and immune response, but little is known on the epigenetic mechanisms mediating the effect of temperature at the cellular and organism level. In this study, we investigated genome...

Full description

Bibliographic Details
Main Authors: Marcello Del Corvo, Barbara Lazzari, Emanuele Capra, Ludmilla Zavarez, Marco Milanesi, Yuri Tani Utsunomiya, Adam Taiti Harth Utsunomiya, Alessandra Stella, Guilherme de Paula Nogueira, Josè Fernando Garcia, Paolo Ajmone-Marsan
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-05-01
Series:Frontiers in Genetics
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2021.633132/full
id doaj-dc70a77a551746ca82977c1a1d46fb67
record_format Article
collection DOAJ
language English
format Article
sources DOAJ
author Marcello Del Corvo
Marcello Del Corvo
Barbara Lazzari
Emanuele Capra
Ludmilla Zavarez
Ludmilla Zavarez
Marco Milanesi
Marco Milanesi
Yuri Tani Utsunomiya
Yuri Tani Utsunomiya
Adam Taiti Harth Utsunomiya
Adam Taiti Harth Utsunomiya
Alessandra Stella
Guilherme de Paula Nogueira
Josè Fernando Garcia
Josè Fernando Garcia
Paolo Ajmone-Marsan
spellingShingle Marcello Del Corvo
Marcello Del Corvo
Barbara Lazzari
Emanuele Capra
Ludmilla Zavarez
Ludmilla Zavarez
Marco Milanesi
Marco Milanesi
Yuri Tani Utsunomiya
Yuri Tani Utsunomiya
Adam Taiti Harth Utsunomiya
Adam Taiti Harth Utsunomiya
Alessandra Stella
Guilherme de Paula Nogueira
Josè Fernando Garcia
Josè Fernando Garcia
Paolo Ajmone-Marsan
Methylome Patterns of Cattle Adaptation to Heat Stress
Frontiers in Genetics
heat stress
epigenetics
DNA methylation
animals welfare
cattle
red blood cell
author_facet Marcello Del Corvo
Marcello Del Corvo
Barbara Lazzari
Emanuele Capra
Ludmilla Zavarez
Ludmilla Zavarez
Marco Milanesi
Marco Milanesi
Yuri Tani Utsunomiya
Yuri Tani Utsunomiya
Adam Taiti Harth Utsunomiya
Adam Taiti Harth Utsunomiya
Alessandra Stella
Guilherme de Paula Nogueira
Josè Fernando Garcia
Josè Fernando Garcia
Paolo Ajmone-Marsan
author_sort Marcello Del Corvo
title Methylome Patterns of Cattle Adaptation to Heat Stress
title_short Methylome Patterns of Cattle Adaptation to Heat Stress
title_full Methylome Patterns of Cattle Adaptation to Heat Stress
title_fullStr Methylome Patterns of Cattle Adaptation to Heat Stress
title_full_unstemmed Methylome Patterns of Cattle Adaptation to Heat Stress
title_sort methylome patterns of cattle adaptation to heat stress
publisher Frontiers Media S.A.
series Frontiers in Genetics
issn 1664-8021
publishDate 2021-05-01
description Heat stress has a detrimental impact on cattle health, welfare and productivity by affecting gene expression, metabolism and immune response, but little is known on the epigenetic mechanisms mediating the effect of temperature at the cellular and organism level. In this study, we investigated genome-wide DNA methylation in blood samples collected from 5 bulls of the heat stress resilient Nellore breed and 5 bulls of the Angus that are more heat stress susceptible, exposed to the sun and high temperature-high humidity during the summer season of the Brazilian South-East region. The methylomes were analyzed during and after the exposure by Reduced Representation Bisulfite Sequencing, which provided genome-wide single-base resolution methylation profiles. Significant methylation changes between stressful and recovery periods were observed in 819 genes. Among these, 351 were only seen in Angus, 366 were specific to Nellore, and 102 showed significant changes in methylation patterns in both breeds. KEGG and Gene Ontology (GO) enrichment analyses showed that responses were breed-specific. Interestingly, in Nellore significant genes and pathways were mainly involved in stress responses and cellular defense and were under methylated during heat stress, whereas in Angus the response was less focused. These preliminary results suggest that heat challenge induces changes in methylation patterns in specific loci, which should be further scrutinized to assess their role in heat tolerance.
topic heat stress
epigenetics
DNA methylation
animals welfare
cattle
red blood cell
url https://www.frontiersin.org/articles/10.3389/fgene.2021.633132/full
work_keys_str_mv AT marcellodelcorvo methylomepatternsofcattleadaptationtoheatstress
AT marcellodelcorvo methylomepatternsofcattleadaptationtoheatstress
AT barbaralazzari methylomepatternsofcattleadaptationtoheatstress
AT emanuelecapra methylomepatternsofcattleadaptationtoheatstress
AT ludmillazavarez methylomepatternsofcattleadaptationtoheatstress
AT ludmillazavarez methylomepatternsofcattleadaptationtoheatstress
AT marcomilanesi methylomepatternsofcattleadaptationtoheatstress
AT marcomilanesi methylomepatternsofcattleadaptationtoheatstress
AT yuritaniutsunomiya methylomepatternsofcattleadaptationtoheatstress
AT yuritaniutsunomiya methylomepatternsofcattleadaptationtoheatstress
AT adamtaitiharthutsunomiya methylomepatternsofcattleadaptationtoheatstress
AT adamtaitiharthutsunomiya methylomepatternsofcattleadaptationtoheatstress
AT alessandrastella methylomepatternsofcattleadaptationtoheatstress
AT guilhermedepaulanogueira methylomepatternsofcattleadaptationtoheatstress
AT josefernandogarcia methylomepatternsofcattleadaptationtoheatstress
AT josefernandogarcia methylomepatternsofcattleadaptationtoheatstress
AT paoloajmonemarsan methylomepatternsofcattleadaptationtoheatstress
_version_ 1721424381179068416
spelling doaj-dc70a77a551746ca82977c1a1d46fb672021-05-28T09:25:25ZengFrontiers Media S.A.Frontiers in Genetics1664-80212021-05-011210.3389/fgene.2021.633132633132Methylome Patterns of Cattle Adaptation to Heat StressMarcello Del Corvo0Marcello Del Corvo1Barbara Lazzari2Emanuele Capra3Ludmilla Zavarez4Ludmilla Zavarez5Marco Milanesi6Marco Milanesi7Yuri Tani Utsunomiya8Yuri Tani Utsunomiya9Adam Taiti Harth Utsunomiya10Adam Taiti Harth Utsunomiya11Alessandra Stella12Guilherme de Paula Nogueira13Josè Fernando Garcia14Josè Fernando Garcia15Paolo Ajmone-Marsan16Department of Animal Science Food and Nutrition – DIANA, Nutrigenomics and Proteomics Research Centre – PRONUTRIGEN, and Biodiversity and Ancient DNA Research Centre, Università Cattolica del Sacro Cuore, Piacenza, ItalyIstituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche IBBA CNR, Milan, ItalyIstituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche IBBA CNR, Milan, ItalyIstituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche IBBA CNR, Milan, ItalySchool of Veterinary Medicine, Araçatuba, Department of Production and Animal Health, São Paulo State University (unesp), Araçatuba, BrazilInternational Atomic Energy Agency, Collaborating Centre on Animal Genomics and Bioinformatics, Araçatuba, BrazilSchool of Veterinary Medicine, Araçatuba, Department of Production and Animal Health, São Paulo State University (unesp), Araçatuba, BrazilInternational Atomic Energy Agency, Collaborating Centre on Animal Genomics and Bioinformatics, Araçatuba, BrazilSchool of Veterinary Medicine, Araçatuba, Department of Production and Animal Health, São Paulo State University (unesp), Araçatuba, BrazilInternational Atomic Energy Agency, Collaborating Centre on Animal Genomics and Bioinformatics, Araçatuba, BrazilSchool of Veterinary Medicine, Araçatuba, Department of Production and Animal Health, São Paulo State University (unesp), Araçatuba, BrazilInternational Atomic Energy Agency, Collaborating Centre on Animal Genomics and Bioinformatics, Araçatuba, BrazilIstituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche IBBA CNR, Milan, ItalySchool of Veterinary Medicine, Araçatuba, Department of Production and Animal Health, São Paulo State University (unesp), Araçatuba, BrazilSchool of Veterinary Medicine, Araçatuba, Department of Production and Animal Health, São Paulo State University (unesp), Araçatuba, BrazilInternational Atomic Energy Agency, Collaborating Centre on Animal Genomics and Bioinformatics, Araçatuba, BrazilDepartment of Animal Science Food and Nutrition – DIANA, Nutrigenomics and Proteomics Research Centre – PRONUTRIGEN, and Biodiversity and Ancient DNA Research Centre, Università Cattolica del Sacro Cuore, Piacenza, ItalyHeat stress has a detrimental impact on cattle health, welfare and productivity by affecting gene expression, metabolism and immune response, but little is known on the epigenetic mechanisms mediating the effect of temperature at the cellular and organism level. In this study, we investigated genome-wide DNA methylation in blood samples collected from 5 bulls of the heat stress resilient Nellore breed and 5 bulls of the Angus that are more heat stress susceptible, exposed to the sun and high temperature-high humidity during the summer season of the Brazilian South-East region. The methylomes were analyzed during and after the exposure by Reduced Representation Bisulfite Sequencing, which provided genome-wide single-base resolution methylation profiles. Significant methylation changes between stressful and recovery periods were observed in 819 genes. Among these, 351 were only seen in Angus, 366 were specific to Nellore, and 102 showed significant changes in methylation patterns in both breeds. KEGG and Gene Ontology (GO) enrichment analyses showed that responses were breed-specific. Interestingly, in Nellore significant genes and pathways were mainly involved in stress responses and cellular defense and were under methylated during heat stress, whereas in Angus the response was less focused. These preliminary results suggest that heat challenge induces changes in methylation patterns in specific loci, which should be further scrutinized to assess their role in heat tolerance.https://www.frontiersin.org/articles/10.3389/fgene.2021.633132/fullheat stressepigeneticsDNA methylationanimals welfarecattlered blood cell