Evaluation of microbial globin promoters for oxygen-limited processes using Escherichia coli

Abstract Oxygen-responsive promoters can be useful for synthetic biology applications, however, information on their characteristics is still limited. Here, we characterized a group of heterologous microaerobic globin promoters in Escherichia coli. Globin promoters from Bacillus subtilis, Campylobac...

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Main Authors: Alvaro R. Lara, Karim E. Jaén, Juan-Carlos Sigala, Lars Regestein, Jochen Büchs
Format: Article
Language:English
Published: BMC 2017-11-01
Series:Journal of Biological Engineering
Subjects:
Online Access:http://link.springer.com/article/10.1186/s13036-017-0082-3
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spelling doaj-dd2172ad511a47808c661b33fabe56692020-11-24T22:10:55ZengBMCJournal of Biological Engineering1754-16112017-11-011111910.1186/s13036-017-0082-3Evaluation of microbial globin promoters for oxygen-limited processes using Escherichia coliAlvaro R. Lara0Karim E. Jaén1Juan-Carlos Sigala2Lars Regestein3Jochen Büchs4Departamento de Procesos y Tecnología, Universidad Autónoma Metropolitana-CuajimalpaDepartamento de Procesos y Tecnología, Universidad Autónoma Metropolitana-CuajimalpaDepartamento de Procesos y Tecnología, Universidad Autónoma Metropolitana-CuajimalpaRWTH Aachen University, AVT - Biochemical EngineeringRWTH Aachen University, AVT - Biochemical EngineeringAbstract Oxygen-responsive promoters can be useful for synthetic biology applications, however, information on their characteristics is still limited. Here, we characterized a group of heterologous microaerobic globin promoters in Escherichia coli. Globin promoters from Bacillus subtilis, Campylobacter jejuni, Deinococcus radiodurans, Streptomyces coelicolor, Salmonella typhi and Vitreoscilla stercoraria were used to express the FMN-binding fluorescent protein (FbFP), which is a non-oxygen dependent marker. FbFP fluorescence was monitored online in cultures at maximum oxygen transfer capacities (OTRmax) of 7 and 11 mmol L−1 h−1. Different FbFP fluorescence intensities were observed and the OTRmax affected the induction level and specific fluorescence emission rate (the product of the specific fluorescence intensity multiplied by the specific growth rate) of all promoters. The promoter from S. typhi displayed the highest fluorescence emission yields (the quotient of the fluorescence intensity divided by the scattered light intensity at every time-point) and rate, and together with the promoters from D. radiodurans and S. coelicolor, the highest induction ratios. These results show the potential of diverse heterologous globin promoters for oxygen-limited processes using E. coli.http://link.springer.com/article/10.1186/s13036-017-0082-3Microaerobic promotersOxygen-limited culturesGlobin promotersFbFP expressionMicrobioreactors
collection DOAJ
language English
format Article
sources DOAJ
author Alvaro R. Lara
Karim E. Jaén
Juan-Carlos Sigala
Lars Regestein
Jochen Büchs
spellingShingle Alvaro R. Lara
Karim E. Jaén
Juan-Carlos Sigala
Lars Regestein
Jochen Büchs
Evaluation of microbial globin promoters for oxygen-limited processes using Escherichia coli
Journal of Biological Engineering
Microaerobic promoters
Oxygen-limited cultures
Globin promoters
FbFP expression
Microbioreactors
author_facet Alvaro R. Lara
Karim E. Jaén
Juan-Carlos Sigala
Lars Regestein
Jochen Büchs
author_sort Alvaro R. Lara
title Evaluation of microbial globin promoters for oxygen-limited processes using Escherichia coli
title_short Evaluation of microbial globin promoters for oxygen-limited processes using Escherichia coli
title_full Evaluation of microbial globin promoters for oxygen-limited processes using Escherichia coli
title_fullStr Evaluation of microbial globin promoters for oxygen-limited processes using Escherichia coli
title_full_unstemmed Evaluation of microbial globin promoters for oxygen-limited processes using Escherichia coli
title_sort evaluation of microbial globin promoters for oxygen-limited processes using escherichia coli
publisher BMC
series Journal of Biological Engineering
issn 1754-1611
publishDate 2017-11-01
description Abstract Oxygen-responsive promoters can be useful for synthetic biology applications, however, information on their characteristics is still limited. Here, we characterized a group of heterologous microaerobic globin promoters in Escherichia coli. Globin promoters from Bacillus subtilis, Campylobacter jejuni, Deinococcus radiodurans, Streptomyces coelicolor, Salmonella typhi and Vitreoscilla stercoraria were used to express the FMN-binding fluorescent protein (FbFP), which is a non-oxygen dependent marker. FbFP fluorescence was monitored online in cultures at maximum oxygen transfer capacities (OTRmax) of 7 and 11 mmol L−1 h−1. Different FbFP fluorescence intensities were observed and the OTRmax affected the induction level and specific fluorescence emission rate (the product of the specific fluorescence intensity multiplied by the specific growth rate) of all promoters. The promoter from S. typhi displayed the highest fluorescence emission yields (the quotient of the fluorescence intensity divided by the scattered light intensity at every time-point) and rate, and together with the promoters from D. radiodurans and S. coelicolor, the highest induction ratios. These results show the potential of diverse heterologous globin promoters for oxygen-limited processes using E. coli.
topic Microaerobic promoters
Oxygen-limited cultures
Globin promoters
FbFP expression
Microbioreactors
url http://link.springer.com/article/10.1186/s13036-017-0082-3
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