Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity

Heterogeneity within tumors presents a challenge to cancer treatment. Here, the authors investigate transcriptional heterogeneity in prostate cancer, examining expression profiles of different tissue components and highlighting expression gradients in the tumor microenvironment.

Bibliographic Details
Main Authors: Emelie Berglund, Jonas Maaskola, Niklas Schultz, Stefanie Friedrich, Maja Marklund, Joseph Bergenstråhle, Firas Tarish, Anna Tanoglidi, Sanja Vickovic, Ludvig Larsson, Fredrik Salmén, Christoph Ogris, Karolina Wallenborg, Jens Lagergren, Patrik Ståhl, Erik Sonnhammer, Thomas Helleday, Joakim Lundeberg
Format: Article
Language:English
Published: Nature Publishing Group 2018-06-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-018-04724-5
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spelling doaj-df809a2fbbdf48cfa7dfe5406664fb322021-05-11T10:07:17ZengNature Publishing GroupNature Communications2041-17232018-06-019111310.1038/s41467-018-04724-5Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneityEmelie Berglund0Jonas Maaskola1Niklas Schultz2Stefanie Friedrich3Maja Marklund4Joseph Bergenstråhle5Firas Tarish6Anna Tanoglidi7Sanja Vickovic8Ludvig Larsson9Fredrik Salmén10Christoph Ogris11Karolina Wallenborg12Jens Lagergren13Patrik Ståhl14Erik Sonnhammer15Thomas Helleday16Joakim Lundeberg17Department of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), Science for Life LaboratoryDepartment of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), Science for Life LaboratoryDepartment of Oncology-Pathology, Karolinska Institutet (KI), Science for Life LaboratoryDepartment of Biochemistry and Biophysics, Stockholm University, Science for Life LaboratoryDepartment of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), Science for Life LaboratoryDepartment of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), Science for Life LaboratoryDepartment of Oncology-Pathology, Karolinska Institutet (KI), Science for Life LaboratoryDepartment of Clinical Pathology, University Uppsala HospitalDepartment of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), Science for Life LaboratoryDepartment of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), Science for Life LaboratoryDepartment of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), Science for Life LaboratoryDepartment of Biochemistry and Biophysics, Stockholm University, Science for Life LaboratoryDepartment of Oncology-Pathology, Karolinska Institutet (KI), Science for Life LaboratoryDepartment of Computational Biology, School of Computer Science and Communication, Royal Institute of Technology (KTH), Science for Life LaboratoryDepartment of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), Science for Life LaboratoryDepartment of Biochemistry and Biophysics, Stockholm University, Science for Life LaboratoryDepartment of Oncology-Pathology, Karolinska Institutet (KI), Science for Life LaboratoryDepartment of Gene Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), Science for Life LaboratoryHeterogeneity within tumors presents a challenge to cancer treatment. Here, the authors investigate transcriptional heterogeneity in prostate cancer, examining expression profiles of different tissue components and highlighting expression gradients in the tumor microenvironment.https://doi.org/10.1038/s41467-018-04724-5
collection DOAJ
language English
format Article
sources DOAJ
author Emelie Berglund
Jonas Maaskola
Niklas Schultz
Stefanie Friedrich
Maja Marklund
Joseph Bergenstråhle
Firas Tarish
Anna Tanoglidi
Sanja Vickovic
Ludvig Larsson
Fredrik Salmén
Christoph Ogris
Karolina Wallenborg
Jens Lagergren
Patrik Ståhl
Erik Sonnhammer
Thomas Helleday
Joakim Lundeberg
spellingShingle Emelie Berglund
Jonas Maaskola
Niklas Schultz
Stefanie Friedrich
Maja Marklund
Joseph Bergenstråhle
Firas Tarish
Anna Tanoglidi
Sanja Vickovic
Ludvig Larsson
Fredrik Salmén
Christoph Ogris
Karolina Wallenborg
Jens Lagergren
Patrik Ståhl
Erik Sonnhammer
Thomas Helleday
Joakim Lundeberg
Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity
Nature Communications
author_facet Emelie Berglund
Jonas Maaskola
Niklas Schultz
Stefanie Friedrich
Maja Marklund
Joseph Bergenstråhle
Firas Tarish
Anna Tanoglidi
Sanja Vickovic
Ludvig Larsson
Fredrik Salmén
Christoph Ogris
Karolina Wallenborg
Jens Lagergren
Patrik Ståhl
Erik Sonnhammer
Thomas Helleday
Joakim Lundeberg
author_sort Emelie Berglund
title Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity
title_short Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity
title_full Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity
title_fullStr Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity
title_full_unstemmed Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity
title_sort spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity
publisher Nature Publishing Group
series Nature Communications
issn 2041-1723
publishDate 2018-06-01
description Heterogeneity within tumors presents a challenge to cancer treatment. Here, the authors investigate transcriptional heterogeneity in prostate cancer, examining expression profiles of different tissue components and highlighting expression gradients in the tumor microenvironment.
url https://doi.org/10.1038/s41467-018-04724-5
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