A 16S rDNA PCR-based theoretical to actual delta approach on culturable mock communities revealed severe losses of diversity information
Abstract Background Subunits of ribosomal RNA genes (rDNAs) characterized by PCR-based protocols have been the proxy for studies in microbial taxonomy, phylogenetics, evolution and ecology. However, relevant factors have shown to interfere in the experimental outputs in a variety of systems. In this...
Main Authors: | Hellen Ribeiro Martins dos Santos, Caio Suzart Argolo, Ronaldo Costa Argôlo-Filho, Leandro Lopes Loguercio |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2019-04-01
|
Series: | BMC Microbiology |
Subjects: | |
Online Access: | http://link.springer.com/article/10.1186/s12866-019-1446-2 |
Similar Items
-
Comparative molecular analysis of Herbaspirillum strains by RAPD, RFLP, and 16S rDNA sequencing
by: Juliana R.L. Soares-Ramos, et al.
Published: (2003-12-01) -
Genomic-based restriction enzyme selection for specific detection of Piscirickettsia salmonis by 16S rDNA PCR-RFLP
by: Dinka eMandakovic, et al.
Published: (2016-05-01) -
Metagenomics of pasteurized and unpasteurized gouda cheese using targeted 16S rDNA sequencing
by: Joelle K. Salazar, et al.
Published: (2018-11-01) -
PCR - RFLP patterns for the differentiation of the Fusarium species in virtue of ITS rDNA
by: Reza Kachuei, et al.
Published: (2015-01-01) -
PCR-RFLP of 16S ribosomal DNA to confirm the identification of Enterococcus gallinarum and Enterococcus casseliflavus isolated from clinical and food samples PCR-RFLP do 16S DNA ribossomal para confirmar a identificação de Enterococcus gallinarum e Enterococcus casseliflavus isolados de amostras clínicas e alimentares
by: Aline Weber Medeiros, et al.
Published: (2010-02-01)