SBMLPkgSpec: a LaTeX style file for SBML package specification documents

Abstract Objective The Systems Biology Markup Language (SBML) is a popular open format for storing and exchanging computational models in biology. The definition of SBML is captured in formal specification documents. SBMLPkgSpec is a LaTeX document style intended to fill the need for a standard form...

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Main Author: Michael Hucka
Format: Article
Language:English
Published: BMC 2017-09-01
Series:BMC Research Notes
Subjects:
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Online Access:http://link.springer.com/article/10.1186/s13104-017-2788-1
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spelling doaj-e11d54a11d544b289066d0e436e912452020-11-25T02:02:18ZengBMCBMC Research Notes1756-05002017-09-011011410.1186/s13104-017-2788-1SBMLPkgSpec: a LaTeX style file for SBML package specification documentsMichael Hucka0Department of Computing and Mathematical Sciences, California Institute of TechnologyAbstract Objective The Systems Biology Markup Language (SBML) is a popular open format for storing and exchanging computational models in biology. The definition of SBML is captured in formal specification documents. SBMLPkgSpec is a LaTeX document style intended to fill the need for a standard format for writing such specification documents. Results Specification documents for SBML Level 3 extensions (known as packages in SBML) are made more uniform with the use of a standard template. SBMLPkgSpec is a LaTeX class that provides a document framework for SBML Level 3 package specifications, to simplify the work of document authors while improving the overall quality of the family of SBML specifications.http://link.springer.com/article/10.1186/s13104-017-2788-1SBMLXMLData formatsSoftwareSimulationSystems biology
collection DOAJ
language English
format Article
sources DOAJ
author Michael Hucka
spellingShingle Michael Hucka
SBMLPkgSpec: a LaTeX style file for SBML package specification documents
BMC Research Notes
SBML
XML
Data formats
Software
Simulation
Systems biology
author_facet Michael Hucka
author_sort Michael Hucka
title SBMLPkgSpec: a LaTeX style file for SBML package specification documents
title_short SBMLPkgSpec: a LaTeX style file for SBML package specification documents
title_full SBMLPkgSpec: a LaTeX style file for SBML package specification documents
title_fullStr SBMLPkgSpec: a LaTeX style file for SBML package specification documents
title_full_unstemmed SBMLPkgSpec: a LaTeX style file for SBML package specification documents
title_sort sbmlpkgspec: a latex style file for sbml package specification documents
publisher BMC
series BMC Research Notes
issn 1756-0500
publishDate 2017-09-01
description Abstract Objective The Systems Biology Markup Language (SBML) is a popular open format for storing and exchanging computational models in biology. The definition of SBML is captured in formal specification documents. SBMLPkgSpec is a LaTeX document style intended to fill the need for a standard format for writing such specification documents. Results Specification documents for SBML Level 3 extensions (known as packages in SBML) are made more uniform with the use of a standard template. SBMLPkgSpec is a LaTeX class that provides a document framework for SBML Level 3 package specifications, to simplify the work of document authors while improving the overall quality of the family of SBML specifications.
topic SBML
XML
Data formats
Software
Simulation
Systems biology
url http://link.springer.com/article/10.1186/s13104-017-2788-1
work_keys_str_mv AT michaelhucka sbmlpkgspecalatexstylefileforsbmlpackagespecificationdocuments
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