A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer Secretome

Summary: The collection of proteins secreted from a cell—the secretome—is of particular interest in cancer pathophysiology due to its diagnostic potential and role in tumorigenesis. However, cancer secretome studies are often limited to one tissue or cancer type or focus on biomarker prediction with...

Full description

Bibliographic Details
Main Authors: Jonathan L. Robinson, Amir Feizi, Mathias Uhlén, Jens Nielsen
Format: Article
Language:English
Published: Elsevier 2019-03-01
Series:Cell Reports
Online Access:http://www.sciencedirect.com/science/article/pii/S2211124719301962
id doaj-e4d9d51f4d374975ac15a11219a32ecb
record_format Article
spelling doaj-e4d9d51f4d374975ac15a11219a32ecb2020-11-25T02:13:27ZengElsevierCell Reports2211-12472019-03-01261026222635.e5A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer SecretomeJonathan L. Robinson0Amir Feizi1Mathias Uhlén2Jens Nielsen3Department of Biology and Biological Engineering, Chalmers University of Technology, Kemivägen 10, Gothenburg, Sweden; Wallenberg Centre for Protein Research, Chalmers University of Technology, Kemivägen 10, Gothenburg, SwedenDepartment of Biology and Biological Engineering, Chalmers University of Technology, Kemivägen 10, Gothenburg, SwedenScience for Life Laboratory, KTH Royal Institute of Technology, Stockholm, Sweden; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, 2800 Kgs. Lyngby, DenmarkDepartment of Biology and Biological Engineering, Chalmers University of Technology, Kemivägen 10, Gothenburg, Sweden; Wallenberg Centre for Protein Research, Chalmers University of Technology, Kemivägen 10, Gothenburg, Sweden; Science for Life Laboratory, KTH Royal Institute of Technology, Stockholm, Sweden; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, 2800 Kgs. Lyngby, Denmark; Corresponding authorSummary: The collection of proteins secreted from a cell—the secretome—is of particular interest in cancer pathophysiology due to its diagnostic potential and role in tumorigenesis. However, cancer secretome studies are often limited to one tissue or cancer type or focus on biomarker prediction without exploring the associated functions. We therefore conducted a pan-cancer analysis of secretome gene expression changes to identify candidate diagnostic biomarkers and to investigate the underlying biological function of these changes. Using transcriptomic data spanning 32 cancer types and 30 healthy tissues, we quantified the relative diagnostic potential of secretome proteins for each cancer. Furthermore, we offer a potential mechanism by which cancer cells relieve secretory pathway stress by decreasing the expression of tissue-specific genes, thereby facilitating the secretion of proteins promoting invasion and proliferation. These results provide a more systematic understanding of the cancer secretome, facilitating its use in diagnostics and its targeting for therapeutic development. : Robinson et al. compare secreted protein expression changes across different cancer types and healthy tissues to identify candidate biomarkers likely to be detectable in biological fluids. Functional analyses reveal a pattern whereby cancers decrease the expression of secreted proteins responsible for tissue of origin function in favor of those supporting proliferation and invasion. Keywords: secretome, protein secretion, cancer biomarkers, unfolded protein response, pan-cancer, systems biologyhttp://www.sciencedirect.com/science/article/pii/S2211124719301962
collection DOAJ
language English
format Article
sources DOAJ
author Jonathan L. Robinson
Amir Feizi
Mathias Uhlén
Jens Nielsen
spellingShingle Jonathan L. Robinson
Amir Feizi
Mathias Uhlén
Jens Nielsen
A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer Secretome
Cell Reports
author_facet Jonathan L. Robinson
Amir Feizi
Mathias Uhlén
Jens Nielsen
author_sort Jonathan L. Robinson
title A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer Secretome
title_short A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer Secretome
title_full A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer Secretome
title_fullStr A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer Secretome
title_full_unstemmed A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer Secretome
title_sort systematic investigation of the malignant functions and diagnostic potential of the cancer secretome
publisher Elsevier
series Cell Reports
issn 2211-1247
publishDate 2019-03-01
description Summary: The collection of proteins secreted from a cell—the secretome—is of particular interest in cancer pathophysiology due to its diagnostic potential and role in tumorigenesis. However, cancer secretome studies are often limited to one tissue or cancer type or focus on biomarker prediction without exploring the associated functions. We therefore conducted a pan-cancer analysis of secretome gene expression changes to identify candidate diagnostic biomarkers and to investigate the underlying biological function of these changes. Using transcriptomic data spanning 32 cancer types and 30 healthy tissues, we quantified the relative diagnostic potential of secretome proteins for each cancer. Furthermore, we offer a potential mechanism by which cancer cells relieve secretory pathway stress by decreasing the expression of tissue-specific genes, thereby facilitating the secretion of proteins promoting invasion and proliferation. These results provide a more systematic understanding of the cancer secretome, facilitating its use in diagnostics and its targeting for therapeutic development. : Robinson et al. compare secreted protein expression changes across different cancer types and healthy tissues to identify candidate biomarkers likely to be detectable in biological fluids. Functional analyses reveal a pattern whereby cancers decrease the expression of secreted proteins responsible for tissue of origin function in favor of those supporting proliferation and invasion. Keywords: secretome, protein secretion, cancer biomarkers, unfolded protein response, pan-cancer, systems biology
url http://www.sciencedirect.com/science/article/pii/S2211124719301962
work_keys_str_mv AT jonathanlrobinson asystematicinvestigationofthemalignantfunctionsanddiagnosticpotentialofthecancersecretome
AT amirfeizi asystematicinvestigationofthemalignantfunctionsanddiagnosticpotentialofthecancersecretome
AT mathiasuhlen asystematicinvestigationofthemalignantfunctionsanddiagnosticpotentialofthecancersecretome
AT jensnielsen asystematicinvestigationofthemalignantfunctionsanddiagnosticpotentialofthecancersecretome
AT jonathanlrobinson systematicinvestigationofthemalignantfunctionsanddiagnosticpotentialofthecancersecretome
AT amirfeizi systematicinvestigationofthemalignantfunctionsanddiagnosticpotentialofthecancersecretome
AT mathiasuhlen systematicinvestigationofthemalignantfunctionsanddiagnosticpotentialofthecancersecretome
AT jensnielsen systematicinvestigationofthemalignantfunctionsanddiagnosticpotentialofthecancersecretome
_version_ 1724905172428128256