Evolution and Functional Divergence of SUN Genes in Plants

SUN-domain containing proteins are crucial nuclear membrane proteins involved in a plethora of biological functions, including meiosis, nuclear morphology, and embryonic development, but their evolutionary history and functional divergence are obscure. In all, 216 SUN proteins from protists, fungi,...

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Main Authors: Li Yuan, Jingwen Pan, Shouhong Zhu, Yan Li, Jinbo Yao, Qiulin Li, Shengtao Fang, Chunyan Liu, Xinyu Wang, Bei Li, Wei Chen, Yongshan Zhang
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-03-01
Series:Frontiers in Plant Science
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fpls.2021.646622/full
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spelling doaj-e6e984fcf8bb49529bfc0c60b362909d2021-03-08T06:38:54ZengFrontiers Media S.A.Frontiers in Plant Science1664-462X2021-03-011210.3389/fpls.2021.646622646622Evolution and Functional Divergence of SUN Genes in PlantsLi Yuan0Jingwen Pan1Shouhong Zhu2Yan Li3Jinbo Yao4Qiulin Li5Shengtao Fang6Chunyan Liu7Xinyu Wang8Bei Li9Wei Chen10Yongshan Zhang11State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, ChinaState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, ChinaState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, ChinaState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, ChinaState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, ChinaState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, ChinaState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, ChinaCollege of Plant Science, Tarim University, Xinjiang, ChinaZhengzhou Research Base, State Key Laboratory of Cotton Biology, Zhengzhou University, Zhengzhou, ChinaState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, ChinaState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, ChinaState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, ChinaSUN-domain containing proteins are crucial nuclear membrane proteins involved in a plethora of biological functions, including meiosis, nuclear morphology, and embryonic development, but their evolutionary history and functional divergence are obscure. In all, 216 SUN proteins from protists, fungi, and plants were divided into two monophyletic clades (Cter-SUN and Mid-SUN). We performed comprehensive evolutionary analyses, investigating the characteristics of different subfamilies in plants. Mid-SUNs further evolved into two subgroups, SUN3 and SUN5, before the emergence of the ancestor of angiosperms, while Cter-SUNs retained one subfamily of SUN1. The two clades were distinct from each other in the conserved residues of the SUN domain, the TM motif, and exon/intron structures. The gene losses occurred with equal frequency between these two clades, but duplication events of Mid-SUNs were more frequent. In cotton, SUN3 proteins are primarily expressed in petals and stamens and are moderately expressed in other tissues, whereas SUN5 proteins are specifically expressed in mature pollen. Virus-induced knock-down and the CRISPR/Cas9-mediated knockout of GbSUN5 both showed higher ratios of aborted seeds, although pollen viability remained normal. Our results indicated divergence of biological function between SUN3 and SUN5, and that SUN5 plays an important role in reproductive development.https://www.frontiersin.org/articles/10.3389/fpls.2021.646622/fullSUN proteinsevolutiondivergencecottonreproductive development
collection DOAJ
language English
format Article
sources DOAJ
author Li Yuan
Jingwen Pan
Shouhong Zhu
Yan Li
Jinbo Yao
Qiulin Li
Shengtao Fang
Chunyan Liu
Xinyu Wang
Bei Li
Wei Chen
Yongshan Zhang
spellingShingle Li Yuan
Jingwen Pan
Shouhong Zhu
Yan Li
Jinbo Yao
Qiulin Li
Shengtao Fang
Chunyan Liu
Xinyu Wang
Bei Li
Wei Chen
Yongshan Zhang
Evolution and Functional Divergence of SUN Genes in Plants
Frontiers in Plant Science
SUN proteins
evolution
divergence
cotton
reproductive development
author_facet Li Yuan
Jingwen Pan
Shouhong Zhu
Yan Li
Jinbo Yao
Qiulin Li
Shengtao Fang
Chunyan Liu
Xinyu Wang
Bei Li
Wei Chen
Yongshan Zhang
author_sort Li Yuan
title Evolution and Functional Divergence of SUN Genes in Plants
title_short Evolution and Functional Divergence of SUN Genes in Plants
title_full Evolution and Functional Divergence of SUN Genes in Plants
title_fullStr Evolution and Functional Divergence of SUN Genes in Plants
title_full_unstemmed Evolution and Functional Divergence of SUN Genes in Plants
title_sort evolution and functional divergence of sun genes in plants
publisher Frontiers Media S.A.
series Frontiers in Plant Science
issn 1664-462X
publishDate 2021-03-01
description SUN-domain containing proteins are crucial nuclear membrane proteins involved in a plethora of biological functions, including meiosis, nuclear morphology, and embryonic development, but their evolutionary history and functional divergence are obscure. In all, 216 SUN proteins from protists, fungi, and plants were divided into two monophyletic clades (Cter-SUN and Mid-SUN). We performed comprehensive evolutionary analyses, investigating the characteristics of different subfamilies in plants. Mid-SUNs further evolved into two subgroups, SUN3 and SUN5, before the emergence of the ancestor of angiosperms, while Cter-SUNs retained one subfamily of SUN1. The two clades were distinct from each other in the conserved residues of the SUN domain, the TM motif, and exon/intron structures. The gene losses occurred with equal frequency between these two clades, but duplication events of Mid-SUNs were more frequent. In cotton, SUN3 proteins are primarily expressed in petals and stamens and are moderately expressed in other tissues, whereas SUN5 proteins are specifically expressed in mature pollen. Virus-induced knock-down and the CRISPR/Cas9-mediated knockout of GbSUN5 both showed higher ratios of aborted seeds, although pollen viability remained normal. Our results indicated divergence of biological function between SUN3 and SUN5, and that SUN5 plays an important role in reproductive development.
topic SUN proteins
evolution
divergence
cotton
reproductive development
url https://www.frontiersin.org/articles/10.3389/fpls.2021.646622/full
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