ESPRIT-Forest: Parallel clustering of massive amplicon sequence data in subquadratic time.
The rapid development of sequencing technology has led to an explosive accumulation of genomic sequence data. Clustering is often the first step to perform in sequence analysis, and hierarchical clustering is one of the most commonly used approaches for this purpose. However, it is currently computa...
Main Authors: | Yunpeng Cai, Wei Zheng, Jin Yao, Yujie Yang, Volker Mai, Qi Mao, Yijun Sun |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2017-04-01
|
Series: | PLoS Computational Biology |
Online Access: | http://europepmc.org/articles/PMC5421816?pdf=render |
Similar Items
-
Massively parallel amplicon sequencing reveals isotype-specific variability of antimicrobial peptide transcripts in Mytilus galloprovincialis.
by: Umberto Rosani, et al.
Published: (2011-01-01) -
Periodic Solutions for Subquadratic Discrete Hamiltonian Systems
by: Xiaoqing Deng
Published: (2007-06-01) -
Periodic Solutions for Subquadratic Discrete Hamiltonian Systems
by: Deng Xiaoqing
Published: (2007-01-01) -
Subquadratic medial-axis approximation in $\mathbb{R}^3$
by: Christian Scheffer, et al.
Published: (2015-09-01) -
Periodic solutions of second-order systems with subquadratic convex potential
by: Yiwei Ye
Published: (2015-07-01)