Diversity of Phylogenetic Information According to the Locus and the Taxonomic Level: An Example from a Parasitic Mesostigmatid Mite Genus

Molecular markers for cladistic analyses may perform differently according to the taxonomic group considered and the historical level under investigation. Here we evaluate the phylogenetic potential of five different markers for resolving evolutionary relationships within the ectoparasitic genus Der...

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Main Authors: Lise Roy, Ashley P. G. Dowling, Claude Marie Chauve, Thierry Buronfosse
Format: Article
Language:English
Published: MDPI AG 2010-04-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:http://www.mdpi.com/1422-0067/11/4/1704/
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spelling doaj-ea295173eac441b49d65e6c5dce71e262020-11-24T21:53:01ZengMDPI AGInternational Journal of Molecular Sciences1422-00672010-04-011141704173410.3390/ijms11041704Diversity of Phylogenetic Information According to the Locus and the Taxonomic Level: An Example from a Parasitic Mesostigmatid Mite GenusLise RoyAshley P. G. DowlingClaude Marie ChauveThierry BuronfosseMolecular markers for cladistic analyses may perform differently according to the taxonomic group considered and the historical level under investigation. Here we evaluate the phylogenetic potential of five different markers for resolving evolutionary relationships within the ectoparasitic genus Dermanyssus at the species level, and their ability to address questions about the evolution of specialization. COI provided 9–18% divergence between species (up to 9% within species), 16S rRNA 10–16% (up to 4% within species), ITS1 and 2 2–9% (up to 1% within species) and Tropomyosin intron n 8–20% (up to 6% within species). EF-1a revealed different non-orthologous copies withinindividuals of Dermanyssus and Ornithonyssus. Tropomyosin intron n was shown containing consistent phylogenetic signal at the specific level within Dermanyssus and represents a promising marker for future prospects in phylogenetics of Acari. Phylogenetic analyses revealed that the generalist condition is apomorphic and D. gallinae mightrepresent a complex of hybridized lineages. The split into hirsutus-group and gallinae-group in Dermanyssus does not seem to be appropriate based upon these results and D. longipes appears to be composed of two different entities. http://www.mdpi.com/1422-0067/11/4/1704/phylogenetic signalevolution of specializationDermanyssusAcariMesostigmata
collection DOAJ
language English
format Article
sources DOAJ
author Lise Roy
Ashley P. G. Dowling
Claude Marie Chauve
Thierry Buronfosse
spellingShingle Lise Roy
Ashley P. G. Dowling
Claude Marie Chauve
Thierry Buronfosse
Diversity of Phylogenetic Information According to the Locus and the Taxonomic Level: An Example from a Parasitic Mesostigmatid Mite Genus
International Journal of Molecular Sciences
phylogenetic signal
evolution of specialization
Dermanyssus
Acari
Mesostigmata
author_facet Lise Roy
Ashley P. G. Dowling
Claude Marie Chauve
Thierry Buronfosse
author_sort Lise Roy
title Diversity of Phylogenetic Information According to the Locus and the Taxonomic Level: An Example from a Parasitic Mesostigmatid Mite Genus
title_short Diversity of Phylogenetic Information According to the Locus and the Taxonomic Level: An Example from a Parasitic Mesostigmatid Mite Genus
title_full Diversity of Phylogenetic Information According to the Locus and the Taxonomic Level: An Example from a Parasitic Mesostigmatid Mite Genus
title_fullStr Diversity of Phylogenetic Information According to the Locus and the Taxonomic Level: An Example from a Parasitic Mesostigmatid Mite Genus
title_full_unstemmed Diversity of Phylogenetic Information According to the Locus and the Taxonomic Level: An Example from a Parasitic Mesostigmatid Mite Genus
title_sort diversity of phylogenetic information according to the locus and the taxonomic level: an example from a parasitic mesostigmatid mite genus
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2010-04-01
description Molecular markers for cladistic analyses may perform differently according to the taxonomic group considered and the historical level under investigation. Here we evaluate the phylogenetic potential of five different markers for resolving evolutionary relationships within the ectoparasitic genus Dermanyssus at the species level, and their ability to address questions about the evolution of specialization. COI provided 9–18% divergence between species (up to 9% within species), 16S rRNA 10–16% (up to 4% within species), ITS1 and 2 2–9% (up to 1% within species) and Tropomyosin intron n 8–20% (up to 6% within species). EF-1a revealed different non-orthologous copies withinindividuals of Dermanyssus and Ornithonyssus. Tropomyosin intron n was shown containing consistent phylogenetic signal at the specific level within Dermanyssus and represents a promising marker for future prospects in phylogenetics of Acari. Phylogenetic analyses revealed that the generalist condition is apomorphic and D. gallinae mightrepresent a complex of hybridized lineages. The split into hirsutus-group and gallinae-group in Dermanyssus does not seem to be appropriate based upon these results and D. longipes appears to be composed of two different entities.
topic phylogenetic signal
evolution of specialization
Dermanyssus
Acari
Mesostigmata
url http://www.mdpi.com/1422-0067/11/4/1704/
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