Dual-function peptides derived from egg white ovalbumin: Bioinformatics identification with validation using in vitro assay

A complete integrated bioinformatics approach was developed to identify angiotensin-converting enzyme (ACE) and dipeptidyl peptidase-4 (DPP-4) inhibitory peptides from egg white ovalbumin. The sequence of the protein was initially obtained from the NCBI database followed by in silico digestion using...

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Main Authors: Mohd Adam Salim Mohd Salim, Chee-Yuen Gan
Format: Article
Language:English
Published: Elsevier 2020-01-01
Series:Journal of Functional Foods
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S1756464619305420
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spelling doaj-eac4d4d3a72147eabb1f2544dc0befd22021-04-30T07:17:36ZengElsevierJournal of Functional Foods1756-46462020-01-0164103618Dual-function peptides derived from egg white ovalbumin: Bioinformatics identification with validation using in vitro assayMohd Adam Salim Mohd Salim0Chee-Yuen Gan1Analytical Biochemistry Research Centre (ABrC), Universiti Sains Malaysia, 11800 USM Penang, MalaysiaCorresponding author.; Analytical Biochemistry Research Centre (ABrC), Universiti Sains Malaysia, 11800 USM Penang, MalaysiaA complete integrated bioinformatics approach was developed to identify angiotensin-converting enzyme (ACE) and dipeptidyl peptidase-4 (DPP-4) inhibitory peptides from egg white ovalbumin. The sequence of the protein was initially obtained from the NCBI database followed by in silico digestion using different enzymes or combination of enzymes. The results showed that 71 peptides were produced. Their bioactivities were then predicted based on the amino acid compositions and sequences as well as the peptide interactions with ACE and DPP-4. Ten highly potential peptides (CF, KM, ELPF, AM, ADHPF, LPR, PR, FR, PRM and GR) were chosen as they obtained p-value less than 0.01. The results from the in vitro validation experiment showed that all peptides were able to inhibit the ACE and DPP-4. Overall, this study underlined the in silico approach as an alternative way for bioactive peptide discovery which could tremendously reduce the cost and time of research.http://www.sciencedirect.com/science/article/pii/S1756464619305420ACE inhibitory peptideDPP-4 inhibitory peptideEgg whiteIn silico analysisOvalbumin
collection DOAJ
language English
format Article
sources DOAJ
author Mohd Adam Salim Mohd Salim
Chee-Yuen Gan
spellingShingle Mohd Adam Salim Mohd Salim
Chee-Yuen Gan
Dual-function peptides derived from egg white ovalbumin: Bioinformatics identification with validation using in vitro assay
Journal of Functional Foods
ACE inhibitory peptide
DPP-4 inhibitory peptide
Egg white
In silico analysis
Ovalbumin
author_facet Mohd Adam Salim Mohd Salim
Chee-Yuen Gan
author_sort Mohd Adam Salim Mohd Salim
title Dual-function peptides derived from egg white ovalbumin: Bioinformatics identification with validation using in vitro assay
title_short Dual-function peptides derived from egg white ovalbumin: Bioinformatics identification with validation using in vitro assay
title_full Dual-function peptides derived from egg white ovalbumin: Bioinformatics identification with validation using in vitro assay
title_fullStr Dual-function peptides derived from egg white ovalbumin: Bioinformatics identification with validation using in vitro assay
title_full_unstemmed Dual-function peptides derived from egg white ovalbumin: Bioinformatics identification with validation using in vitro assay
title_sort dual-function peptides derived from egg white ovalbumin: bioinformatics identification with validation using in vitro assay
publisher Elsevier
series Journal of Functional Foods
issn 1756-4646
publishDate 2020-01-01
description A complete integrated bioinformatics approach was developed to identify angiotensin-converting enzyme (ACE) and dipeptidyl peptidase-4 (DPP-4) inhibitory peptides from egg white ovalbumin. The sequence of the protein was initially obtained from the NCBI database followed by in silico digestion using different enzymes or combination of enzymes. The results showed that 71 peptides were produced. Their bioactivities were then predicted based on the amino acid compositions and sequences as well as the peptide interactions with ACE and DPP-4. Ten highly potential peptides (CF, KM, ELPF, AM, ADHPF, LPR, PR, FR, PRM and GR) were chosen as they obtained p-value less than 0.01. The results from the in vitro validation experiment showed that all peptides were able to inhibit the ACE and DPP-4. Overall, this study underlined the in silico approach as an alternative way for bioactive peptide discovery which could tremendously reduce the cost and time of research.
topic ACE inhibitory peptide
DPP-4 inhibitory peptide
Egg white
In silico analysis
Ovalbumin
url http://www.sciencedirect.com/science/article/pii/S1756464619305420
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AT cheeyuengan dualfunctionpeptidesderivedfromeggwhiteovalbuminbioinformaticsidentificationwithvalidationusinginvitroassay
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