Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient

Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient

Butyricimonas phoceensis strain AT9 (= CSUR 2478 = DSM 100838) was isolated from a stool sample from a morbidly obese French patient living in Marseille using the culturomics approach. The genome of this Gram-negative-staining, anaerobic and non–spore forming rod bacillus is 4 736 949 bp long and co...

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Main Authors: A.H. Togo, A. Diop, G. Dubourg, T.T. Nguyen, C. Andrieu, A. Caputo, C. Couderc, P.-E. Fournier, M. Maraninchi, R. Valero, D. Raoult, M. Million
Format: Article
Language:English
Published: Elsevier 2016-11-01
Series:New Microbes and New Infections
Subjects:
Butyrate
Butyricimonas phoceensissp. nov.
culturomics
genome
obesity
taxonogenomics
Online Access:http://www.sciencedirect.com/science/article/pii/S2052297516300816
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spelling doaj-ef6c7d2621d544f3be7d92080043e0862020-11-24T21:47:21ZengElsevierNew Microbes and New Infections2052-29752016-11-0114C384810.1016/j.nmni.2016.07.010Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patientA.H. Togo0A. Diop1G. Dubourg2T.T. Nguyen3C. Andrieu4A. Caputo5C. Couderc6P.-E. Fournier7M. Maraninchi8R. Valero9D. Raoult10M. Million11Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, NORT “Nutrition, Obesity and Risk of Thrombosis”, INSERM1062, INRA1260, F-13385 Marseille, FranceAix Marseille Université, NORT “Nutrition, Obesity and Risk of Thrombosis”, INSERM1062, INRA1260, F-13385 Marseille, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceButyricimonas phoceensis strain AT9 (= CSUR 2478 = DSM 100838) was isolated from a stool sample from a morbidly obese French patient living in Marseille using the culturomics approach. The genome of this Gram-negative-staining, anaerobic and non–spore forming rod bacillus is 4 736 949 bp long and contains 3947 protein-coding genes. Genomic analysis identified 173 genes as ORFans (4.5%) and 1650 orthologous proteins (42%) not shared with the closest phylogenetic species, Butyricimonas virosa. Its major fatty acid was the branched acid iso-C15:0 (62.3%).http://www.sciencedirect.com/science/article/pii/S2052297516300816ButyrateButyricimonas phoceensissp. nov.culturomicsgenomeobesitytaxonogenomics
collection DOAJ
language English
format Article
sources DOAJ
author A.H. Togo
A. Diop
G. Dubourg
T.T. Nguyen
C. Andrieu
A. Caputo
C. Couderc
P.-E. Fournier
M. Maraninchi
R. Valero
D. Raoult
M. Million
spellingShingle A.H. Togo
A. Diop
G. Dubourg
T.T. Nguyen
C. Andrieu
A. Caputo
C. Couderc
P.-E. Fournier
M. Maraninchi
R. Valero
D. Raoult
M. Million
Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient
New Microbes and New Infections
Butyrate
Butyricimonas phoceensissp. nov.
culturomics
genome
obesity
taxonogenomics
author_facet A.H. Togo
A. Diop
G. Dubourg
T.T. Nguyen
C. Andrieu
A. Caputo
C. Couderc
P.-E. Fournier
M. Maraninchi
R. Valero
D. Raoult
M. Million
author_sort A.H. Togo
title Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient
title_short Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient
title_full Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient
title_fullStr Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient
title_full_unstemmed Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient
title_sort butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a french morbidly obese patient
publisher Elsevier
series New Microbes and New Infections
issn 2052-2975
publishDate 2016-11-01
description Butyricimonas phoceensis strain AT9 (= CSUR 2478 = DSM 100838) was isolated from a stool sample from a morbidly obese French patient living in Marseille using the culturomics approach. The genome of this Gram-negative-staining, anaerobic and non–spore forming rod bacillus is 4 736 949 bp long and contains 3947 protein-coding genes. Genomic analysis identified 173 genes as ORFans (4.5%) and 1650 orthologous proteins (42%) not shared with the closest phylogenetic species, Butyricimonas virosa. Its major fatty acid was the branched acid iso-C15:0 (62.3%).
topic Butyrate
Butyricimonas phoceensissp. nov.
culturomics
genome
obesity
taxonogenomics
url http://www.sciencedirect.com/science/article/pii/S2052297516300816
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