Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient
Butyricimonas phoceensis strain AT9 (= CSUR 2478 = DSM 100838) was isolated from a stool sample from a morbidly obese French patient living in Marseille using the culturomics approach. The genome of this Gram-negative-staining, anaerobic and non–spore forming rod bacillus is 4 736 949 bp long and co...
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doaj-ef6c7d2621d544f3be7d92080043e0862020-11-24T21:47:21ZengElsevierNew Microbes and New Infections2052-29752016-11-0114C384810.1016/j.nmni.2016.07.010Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patientA.H. Togo0A. Diop1G. Dubourg2T.T. Nguyen3C. Andrieu4A. Caputo5C. Couderc6P.-E. Fournier7M. Maraninchi8R. Valero9D. Raoult10M. Million11Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, NORT “Nutrition, Obesity and Risk of Thrombosis”, INSERM1062, INRA1260, F-13385 Marseille, FranceAix Marseille Université, NORT “Nutrition, Obesity and Risk of Thrombosis”, INSERM1062, INRA1260, F-13385 Marseille, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, FranceButyricimonas phoceensis strain AT9 (= CSUR 2478 = DSM 100838) was isolated from a stool sample from a morbidly obese French patient living in Marseille using the culturomics approach. The genome of this Gram-negative-staining, anaerobic and non–spore forming rod bacillus is 4 736 949 bp long and contains 3947 protein-coding genes. Genomic analysis identified 173 genes as ORFans (4.5%) and 1650 orthologous proteins (42%) not shared with the closest phylogenetic species, Butyricimonas virosa. Its major fatty acid was the branched acid iso-C15:0 (62.3%).http://www.sciencedirect.com/science/article/pii/S2052297516300816ButyrateButyricimonas phoceensissp. nov.culturomicsgenomeobesitytaxonogenomics |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
A.H. Togo A. Diop G. Dubourg T.T. Nguyen C. Andrieu A. Caputo C. Couderc P.-E. Fournier M. Maraninchi R. Valero D. Raoult M. Million |
spellingShingle |
A.H. Togo A. Diop G. Dubourg T.T. Nguyen C. Andrieu A. Caputo C. Couderc P.-E. Fournier M. Maraninchi R. Valero D. Raoult M. Million Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient New Microbes and New Infections Butyrate Butyricimonas phoceensissp. nov. culturomics genome obesity taxonogenomics |
author_facet |
A.H. Togo A. Diop G. Dubourg T.T. Nguyen C. Andrieu A. Caputo C. Couderc P.-E. Fournier M. Maraninchi R. Valero D. Raoult M. Million |
author_sort |
A.H. Togo |
title |
Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient |
title_short |
Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient |
title_full |
Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient |
title_fullStr |
Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient |
title_full_unstemmed |
Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient |
title_sort |
butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a french morbidly obese patient |
publisher |
Elsevier |
series |
New Microbes and New Infections |
issn |
2052-2975 |
publishDate |
2016-11-01 |
description |
Butyricimonas phoceensis strain AT9 (= CSUR 2478 = DSM 100838) was isolated from a stool sample from a morbidly obese French patient living in Marseille using the culturomics approach. The genome of this Gram-negative-staining, anaerobic and non–spore forming rod bacillus is 4 736 949 bp long and contains 3947 protein-coding genes. Genomic analysis identified 173 genes as ORFans (4.5%) and 1650 orthologous proteins (42%) not shared with the closest phylogenetic species, Butyricimonas virosa. Its major fatty acid was the branched acid iso-C15:0 (62.3%). |
topic |
Butyrate Butyricimonas phoceensissp. nov. culturomics genome obesity taxonogenomics |
url |
http://www.sciencedirect.com/science/article/pii/S2052297516300816 |
work_keys_str_mv |
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