Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice

Lake Vostok is the largest of the nearly 400 subglacial Antarctic lakes and has been continuously buried by glacial ice for 15 million years. Extreme cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier) and dissolved oxygen (delivered by melting meteoric ice), in...

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Main Authors: Tom D'Elia, Robyn Edgar, Ram Veerapaneni, Zeynep A. Koçer, Scott O. Rogers, Yury M. Shtarkman
Format: Article
Language:English
Published: MDPI AG 2013-03-01
Series:Biology
Subjects:
Online Access:http://www.mdpi.com/2079-7737/2/2/629
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spelling doaj-f259ffab26694fc7a9aca712793ac0072020-11-25T00:49:52ZengMDPI AGBiology2079-77372013-03-012262965010.3390/biology2020629Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion IceTom D'EliaRobyn EdgarRam VeerapaneniZeynep A. KoçerScott O. RogersYury M. ShtarkmanLake Vostok is the largest of the nearly 400 subglacial Antarctic lakes and has been continuously buried by glacial ice for 15 million years. Extreme cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier) and dissolved oxygen (delivered by melting meteoric ice), in addition to limited nutrients and complete darkness, combine to produce one of the most extreme environments on Earth. Metagenomic/metatranscriptomic analyses of ice that accreted over a shallow embayment and over the southern main lake basin indicate the presence of thousands of species of organisms (94% Bacteria, 6% Eukarya, and two Archaea). The predominant bacterial sequences were closest to those from species of Firmicutes, Proteobacteria and Actinobacteria, while the predominant eukaryotic sequences were most similar to those from species of ascomycetous and basidiomycetous Fungi. Based on the sequence data, the lake appears to contain a mixture of autotrophs and heterotrophs capable of performing nitrogen fixation, nitrogen cycling, carbon fixation and nutrient recycling. Sequences closest to those of psychrophiles and thermophiles indicate a cold lake with possible hydrothermal activity. Sequences most similar to those from marine and aquatic species suggest the presence of marine and freshwater regions.http://www.mdpi.com/2079-7737/2/2/629Lake Vostoksubglacial lakemetagenomicmetatranscriptomicmarineaquatic
collection DOAJ
language English
format Article
sources DOAJ
author Tom D'Elia
Robyn Edgar
Ram Veerapaneni
Zeynep A. Koçer
Scott O. Rogers
Yury M. Shtarkman
spellingShingle Tom D'Elia
Robyn Edgar
Ram Veerapaneni
Zeynep A. Koçer
Scott O. Rogers
Yury M. Shtarkman
Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
Biology
Lake Vostok
subglacial lake
metagenomic
metatranscriptomic
marine
aquatic
author_facet Tom D'Elia
Robyn Edgar
Ram Veerapaneni
Zeynep A. Koçer
Scott O. Rogers
Yury M. Shtarkman
author_sort Tom D'Elia
title Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
title_short Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
title_full Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
title_fullStr Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
title_full_unstemmed Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
title_sort ecology of subglacial lake vostok (antarctica), based on metagenomic/metatranscriptomic analyses of accretion ice
publisher MDPI AG
series Biology
issn 2079-7737
publishDate 2013-03-01
description Lake Vostok is the largest of the nearly 400 subglacial Antarctic lakes and has been continuously buried by glacial ice for 15 million years. Extreme cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier) and dissolved oxygen (delivered by melting meteoric ice), in addition to limited nutrients and complete darkness, combine to produce one of the most extreme environments on Earth. Metagenomic/metatranscriptomic analyses of ice that accreted over a shallow embayment and over the southern main lake basin indicate the presence of thousands of species of organisms (94% Bacteria, 6% Eukarya, and two Archaea). The predominant bacterial sequences were closest to those from species of Firmicutes, Proteobacteria and Actinobacteria, while the predominant eukaryotic sequences were most similar to those from species of ascomycetous and basidiomycetous Fungi. Based on the sequence data, the lake appears to contain a mixture of autotrophs and heterotrophs capable of performing nitrogen fixation, nitrogen cycling, carbon fixation and nutrient recycling. Sequences closest to those of psychrophiles and thermophiles indicate a cold lake with possible hydrothermal activity. Sequences most similar to those from marine and aquatic species suggest the presence of marine and freshwater regions.
topic Lake Vostok
subglacial lake
metagenomic
metatranscriptomic
marine
aquatic
url http://www.mdpi.com/2079-7737/2/2/629
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