Identification of the iduronate-2-sulfatase proteome in wild-type mouse brain
Iduronate-2-sulfatase (IDS) is a lysosomal enzyme involved in the metabolism of the glycosaminoglycans heparan (HS) and dermatan (DS) sulfate. Mutations on IDS gene produce mucopolysaccharidosis II (MPS II), characterized by the lysosomal accumulation of HS and DS, leading to severe damage of the ce...
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doaj-f53c49b2cb0a4b2aa34b186210b7a0742020-11-25T02:49:21ZengElsevierHeliyon2405-84402019-05-0155e01667Identification of the iduronate-2-sulfatase proteome in wild-type mouse brainCarolina Cardona0Eliana Benincore1Natalia Pimentel2Luis H. Reyes3Camilo Patarroyo4Alexander Rodríguez-López5M. Martin-Rufian6Luis Alejandro Barrera7Carlos J. Alméciga-Díaz8Institute for the Study of Inborn Errors of Metabolism, School of Sciences, Pontificia Universidad Javeriana, Bogotá, Colombia; Corresponding author.Institute for the Study of Inborn Errors of Metabolism, School of Sciences, Pontificia Universidad Javeriana, Bogotá, ColombiaInstitute for the Study of Inborn Errors of Metabolism, School of Sciences, Pontificia Universidad Javeriana, Bogotá, ColombiaInstitute for the Study of Inborn Errors of Metabolism, School of Sciences, Pontificia Universidad Javeriana, Bogotá, Colombia; Process and Product Design Group (GDPP), Department of Chemical Engineering, Universidad de los Andes, Bogotá, ColombiaInstitute for the Study of Inborn Errors of Metabolism, School of Sciences, Pontificia Universidad Javeriana, Bogotá, ColombiaInstitute for the Study of Inborn Errors of Metabolism, School of Sciences, Pontificia Universidad Javeriana, Bogotá, Colombia; Chemistry Department, School of Sciences, Pontificia Universidad Javeriana, Bogotá, ColombiaCentral Services Research Support, Proteomics Unit, Universidad de Malaga, SpainInstitute for the Study of Inborn Errors of Metabolism, School of Sciences, Pontificia Universidad Javeriana, Bogotá, Colombia; Clínica de Errores Innatos del Metabolismo, Hospital Universitario San Ignacio, Bogotá, ColombiaInstitute for the Study of Inborn Errors of Metabolism, School of Sciences, Pontificia Universidad Javeriana, Bogotá, Colombia; Corresponding author.Iduronate-2-sulfatase (IDS) is a lysosomal enzyme involved in the metabolism of the glycosaminoglycans heparan (HS) and dermatan (DS) sulfate. Mutations on IDS gene produce mucopolysaccharidosis II (MPS II), characterized by the lysosomal accumulation of HS and DS, leading to severe damage of the central nervous system (CNS) and other tissues. In this study, we used a neurochemistry and proteomic approaches to identify the brain distribution of IDS and its interacting proteins on wild-type mouse brain. IDS immunoreactivity showed a robust staining throughout the entire brain, suggesting an intracellular reactivity in nerve cells and astrocytes. By using affinity purification and mass spectrometry we identified 187 putative IDS partners-proteins, mainly hydrolases, cytoskeletal proteins, transporters, transferases, oxidoreductases, nucleic acid binding proteins, membrane traffic proteins, chaperons and enzyme modulators, among others. The interactions with some of these proteins were predicted by using bioinformatics tools and confirmed by co-immunoprecipitation analysis and Blue Native PAGE. In addition, we identified cytosolic IDS-complexes containing proteins from predicted highly connected nodes (hubs), with molecular functions including catalytic activity, redox balance, binding, transport, receptor activity and structural molecule activity. The proteins identified in this study would provide new insights about IDS physiological role into the CNS and its potential role in the brain-specific protein networks.http://www.sciencedirect.com/science/article/pii/S240584401931076XBiochemistryBioinformaticsBiotechnologyCell biologyComputational biology |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Carolina Cardona Eliana Benincore Natalia Pimentel Luis H. Reyes Camilo Patarroyo Alexander Rodríguez-López M. Martin-Rufian Luis Alejandro Barrera Carlos J. Alméciga-Díaz |
spellingShingle |
Carolina Cardona Eliana Benincore Natalia Pimentel Luis H. Reyes Camilo Patarroyo Alexander Rodríguez-López M. Martin-Rufian Luis Alejandro Barrera Carlos J. Alméciga-Díaz Identification of the iduronate-2-sulfatase proteome in wild-type mouse brain Heliyon Biochemistry Bioinformatics Biotechnology Cell biology Computational biology |
author_facet |
Carolina Cardona Eliana Benincore Natalia Pimentel Luis H. Reyes Camilo Patarroyo Alexander Rodríguez-López M. Martin-Rufian Luis Alejandro Barrera Carlos J. Alméciga-Díaz |
author_sort |
Carolina Cardona |
title |
Identification of the iduronate-2-sulfatase proteome in wild-type mouse brain |
title_short |
Identification of the iduronate-2-sulfatase proteome in wild-type mouse brain |
title_full |
Identification of the iduronate-2-sulfatase proteome in wild-type mouse brain |
title_fullStr |
Identification of the iduronate-2-sulfatase proteome in wild-type mouse brain |
title_full_unstemmed |
Identification of the iduronate-2-sulfatase proteome in wild-type mouse brain |
title_sort |
identification of the iduronate-2-sulfatase proteome in wild-type mouse brain |
publisher |
Elsevier |
series |
Heliyon |
issn |
2405-8440 |
publishDate |
2019-05-01 |
description |
Iduronate-2-sulfatase (IDS) is a lysosomal enzyme involved in the metabolism of the glycosaminoglycans heparan (HS) and dermatan (DS) sulfate. Mutations on IDS gene produce mucopolysaccharidosis II (MPS II), characterized by the lysosomal accumulation of HS and DS, leading to severe damage of the central nervous system (CNS) and other tissues. In this study, we used a neurochemistry and proteomic approaches to identify the brain distribution of IDS and its interacting proteins on wild-type mouse brain. IDS immunoreactivity showed a robust staining throughout the entire brain, suggesting an intracellular reactivity in nerve cells and astrocytes. By using affinity purification and mass spectrometry we identified 187 putative IDS partners-proteins, mainly hydrolases, cytoskeletal proteins, transporters, transferases, oxidoreductases, nucleic acid binding proteins, membrane traffic proteins, chaperons and enzyme modulators, among others. The interactions with some of these proteins were predicted by using bioinformatics tools and confirmed by co-immunoprecipitation analysis and Blue Native PAGE. In addition, we identified cytosolic IDS-complexes containing proteins from predicted highly connected nodes (hubs), with molecular functions including catalytic activity, redox balance, binding, transport, receptor activity and structural molecule activity. The proteins identified in this study would provide new insights about IDS physiological role into the CNS and its potential role in the brain-specific protein networks. |
topic |
Biochemistry Bioinformatics Biotechnology Cell biology Computational biology |
url |
http://www.sciencedirect.com/science/article/pii/S240584401931076X |
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