The application of ZFNet model on the MRI diagnosis of glioma

Background Glioma is a kind of intracranial space⁃occupying lesion, which causes heavy disease burden. For glioma patients, early accurate diagnosis and early treatment could effectively prolong the progression free survival. Suspected glioma patients would be firstly examined by MRI for diagnosis....

Full description

Bibliographic Details
Main Authors: JING Xi⁃yue, QIAO Jie, YAO Xiu⁃hua, XU Li⁃xia, YAN Hua
Format: Article
Language:English
Published: Tianjin Huanhu Hospital 2021-03-01
Series:Chinese Journal of Contemporary Neurology and Neurosurgery
Subjects:
Online Access:http://www.cjcnn.org/index.php/cjcnn/article/view/2290
id doaj-f5a8628e3ee74e05b09be61167c0477a
record_format Article
spelling doaj-f5a8628e3ee74e05b09be61167c0477a2021-04-06T06:51:56ZengTianjin Huanhu HospitalChinese Journal of Contemporary Neurology and Neurosurgery1672-67311672-67312021-03-01213156161The application of ZFNet model on the MRI diagnosis of gliomaJING Xi⁃yue0 QIAO Jie1YAO Xiu⁃hua2XU Li⁃xia3YAN Hua4Tianjin Neurosurgical Institute, Tianjin Huanhu Hospital; Tianjin Key Laboratory of Cerebral Vascular and Neurodegenerative Diseases, Tianjin 300350, ChinaTianjin Neurosurgical Institute, Tianjin Huanhu Hospital; Tianjin Key Laboratory of Cerebral Vascular and Neurodegenerative Diseases, Tianjin 300350, ChinaTianjin Neurosurgical Institute, Tianjin Huanhu Hospital; Tianjin Key Laboratory of Cerebral Vascular and Neurodegenerative Diseases, Tianjin 300350, ChinaTianjin Neurosurgical Institute, Tianjin Huanhu Hospital; Tianjin Key Laboratory of Cerebral Vascular and Neurodegenerative Diseases, Tianjin 300350, ChinaTianjin Neurosurgical Institute, Tianjin Huanhu Hospital; Tianjin Key Laboratory of Cerebral Vascular and Neurodegenerative Diseases, Tianjin 300350, ChinaBackground Glioma is a kind of intracranial space⁃occupying lesion, which causes heavy disease burden. For glioma patients, early accurate diagnosis and early treatment could effectively prolong the progression free survival. Suspected glioma patients would be firstly examined by MRI for diagnosis. The MRI images were mainly read by radiologists artificially. The diagnosis by different radiologists might be different, and the heavy workload might cause a decline in reading efficiency. In recent years, it is becoming possible to use deep learning technology for medical image recognition and diagnosis. This study used machine learning algorithms related to artificial neural network (ANN) to assist image practitioner in reading the head MRI images of patients with glioma, which may cause labor⁃saving, and could increase the efficiency of reading images and reduce the different results cause by different personal experiencse. Methods These images were from The Cancer Imaging Archive (TCIA) database. Format of these images was DICOM. And they were from 130 adult glioma cases, a total of 40 036 copies. These images were randomly split as training set (28 025 copies) and test set (12 011 copies). Then in each set, images were split as "tumor image" and "normal image" according to medical experts' annotation. ZFNet model, a type of convolutional neural network, was used to build image recognition and classification model. The reinforcement learning curve was draw to observe the trend of accuracy of training changed with the training steps. Put the test set into the model, the overall classification accuracy of all MRI images, the positive predictive value, sensitivity, specificity and F1 ⁃ measure of the tumor images were calculated. At the same time, AlexNet was also used to build a same model to compare with the ZFNet model by the prediction indexes of the classification ability of MRI images (the prediction ability of diagnosis of glioma). Results The training accuracy of ZFNet model was 99.7% after 38 757 steps and of the AlexNet model was 98.23% after 37 984 steps. After testing, the image prediction accuracy of all MRI images of ZFNet model was 84.42% (10 140/12 011), the positive predictive value of prediction of "tumor image" was 80.77% (4817/5964), the sensitivity was 86.93% (4817/5541), the specificity was 82.27% (5323/6470), and the F1⁃measure was 83.74%. The above indexes of AlexNet model were 80.74% (9698/12 011), 77.68% (4529/5830), 81.74% (4529/5541), 79.89% (5169/6470) and 79.66%, respectively. The classification performances of ZFNet model were satisfied and were superior to AlexNet model in each dimension. Conclusions ZFNet model has a good prediction performance ability in glioma brain MRI image classification, and it is able to provide a good technical support for establishing a glioma image aided diagnosis model. doi:10.3969/j.issn.1672⁃6731.2021.03.006http://www.cjcnn.org/index.php/cjcnn/article/view/2290gliomaartificial intelligencemagnetic resonance imaging
collection DOAJ
language English
format Article
sources DOAJ
author JING Xi⁃yue
QIAO Jie
YAO Xiu⁃hua
XU Li⁃xia
YAN Hua
spellingShingle JING Xi⁃yue
QIAO Jie
YAO Xiu⁃hua
XU Li⁃xia
YAN Hua
The application of ZFNet model on the MRI diagnosis of glioma
Chinese Journal of Contemporary Neurology and Neurosurgery
glioma
artificial intelligence
magnetic resonance imaging
author_facet JING Xi⁃yue
QIAO Jie
YAO Xiu⁃hua
XU Li⁃xia
YAN Hua
author_sort JING Xi⁃yue
title The application of ZFNet model on the MRI diagnosis of glioma
title_short The application of ZFNet model on the MRI diagnosis of glioma
title_full The application of ZFNet model on the MRI diagnosis of glioma
title_fullStr The application of ZFNet model on the MRI diagnosis of glioma
title_full_unstemmed The application of ZFNet model on the MRI diagnosis of glioma
title_sort application of zfnet model on the mri diagnosis of glioma
publisher Tianjin Huanhu Hospital
series Chinese Journal of Contemporary Neurology and Neurosurgery
issn 1672-6731
1672-6731
publishDate 2021-03-01
description Background Glioma is a kind of intracranial space⁃occupying lesion, which causes heavy disease burden. For glioma patients, early accurate diagnosis and early treatment could effectively prolong the progression free survival. Suspected glioma patients would be firstly examined by MRI for diagnosis. The MRI images were mainly read by radiologists artificially. The diagnosis by different radiologists might be different, and the heavy workload might cause a decline in reading efficiency. In recent years, it is becoming possible to use deep learning technology for medical image recognition and diagnosis. This study used machine learning algorithms related to artificial neural network (ANN) to assist image practitioner in reading the head MRI images of patients with glioma, which may cause labor⁃saving, and could increase the efficiency of reading images and reduce the different results cause by different personal experiencse. Methods These images were from The Cancer Imaging Archive (TCIA) database. Format of these images was DICOM. And they were from 130 adult glioma cases, a total of 40 036 copies. These images were randomly split as training set (28 025 copies) and test set (12 011 copies). Then in each set, images were split as "tumor image" and "normal image" according to medical experts' annotation. ZFNet model, a type of convolutional neural network, was used to build image recognition and classification model. The reinforcement learning curve was draw to observe the trend of accuracy of training changed with the training steps. Put the test set into the model, the overall classification accuracy of all MRI images, the positive predictive value, sensitivity, specificity and F1 ⁃ measure of the tumor images were calculated. At the same time, AlexNet was also used to build a same model to compare with the ZFNet model by the prediction indexes of the classification ability of MRI images (the prediction ability of diagnosis of glioma). Results The training accuracy of ZFNet model was 99.7% after 38 757 steps and of the AlexNet model was 98.23% after 37 984 steps. After testing, the image prediction accuracy of all MRI images of ZFNet model was 84.42% (10 140/12 011), the positive predictive value of prediction of "tumor image" was 80.77% (4817/5964), the sensitivity was 86.93% (4817/5541), the specificity was 82.27% (5323/6470), and the F1⁃measure was 83.74%. The above indexes of AlexNet model were 80.74% (9698/12 011), 77.68% (4529/5830), 81.74% (4529/5541), 79.89% (5169/6470) and 79.66%, respectively. The classification performances of ZFNet model were satisfied and were superior to AlexNet model in each dimension. Conclusions ZFNet model has a good prediction performance ability in glioma brain MRI image classification, and it is able to provide a good technical support for establishing a glioma image aided diagnosis model. doi:10.3969/j.issn.1672⁃6731.2021.03.006
topic glioma
artificial intelligence
magnetic resonance imaging
url http://www.cjcnn.org/index.php/cjcnn/article/view/2290
work_keys_str_mv AT jingxiyue theapplicationofzfnetmodelonthemridiagnosisofglioma
AT qiaojie theapplicationofzfnetmodelonthemridiagnosisofglioma
AT yaoxiuhua theapplicationofzfnetmodelonthemridiagnosisofglioma
AT xulixia theapplicationofzfnetmodelonthemridiagnosisofglioma
AT yanhua theapplicationofzfnetmodelonthemridiagnosisofglioma
AT jingxiyue applicationofzfnetmodelonthemridiagnosisofglioma
AT qiaojie applicationofzfnetmodelonthemridiagnosisofglioma
AT yaoxiuhua applicationofzfnetmodelonthemridiagnosisofglioma
AT xulixia applicationofzfnetmodelonthemridiagnosisofglioma
AT yanhua applicationofzfnetmodelonthemridiagnosisofglioma
_version_ 1721538617114886144