ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events
Abstract Background While the reconstruction of transcripts from a sample of RNA-Seq data is a computationally expensive and complicated task, the detection of splicing events from RNA-Seq data and a gene annotation is computationally feasible. This latter task, which is adequate for many transcript...
Main Authors: | Luca Denti, Raffaella Rizzi, Stefano Beretta, Gianluca Della Vedova, Marco Previtali, Paola Bonizzoni |
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Format: | Article |
Language: | English |
Published: |
BMC
2018-11-01
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Series: | BMC Bioinformatics |
Subjects: | |
Online Access: | http://link.springer.com/article/10.1186/s12859-018-2436-3 |
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