The Novel Serine/Threonine Protein Kinase LmjF.22.0810 from <i>Leishmania major</i> may be Involved in the Resistance to Drugs such as Paromomycin

The identification and clarification of the mechanisms of action of drugs used against leishmaniasis may improve their administration regimens and prevent the development of resistant strains. Herein, for the first time, we describe the structure of the putatively essential Ser/Thr kinase LmjF.22.08...

Full description

Bibliographic Details
Main Authors: Andrés Vacas, Celia Fernández-Rubio, Miriam Algarabel, José Peña-Guerrero, Esther Larrea, Fabio Rocha Formiga, Alfonso T. García-Sosa, Paul A. Nguewa
Format: Article
Language:English
Published: MDPI AG 2019-11-01
Series:Biomolecules
Subjects:
ntd
Online Access:https://www.mdpi.com/2218-273X/9/11/723
id doaj-f715d9bcc4a547f3848352428924f995
record_format Article
spelling doaj-f715d9bcc4a547f3848352428924f9952020-11-25T01:50:57ZengMDPI AGBiomolecules2218-273X2019-11-0191172310.3390/biom9110723biom9110723The Novel Serine/Threonine Protein Kinase LmjF.22.0810 from <i>Leishmania major</i> may be Involved in the Resistance to Drugs such as ParomomycinAndrés Vacas0Celia Fernández-Rubio1Miriam Algarabel2José Peña-Guerrero3Esther Larrea4Fabio Rocha Formiga5Alfonso T. García-Sosa6Paul A. Nguewa7Department of Microbiology and Parasitology, ISTUN Institute of Tropical Health, University of Navarra, IdiSNA (Navarra Institute for Health Research). Pamplona, E-31008 Navarra, SpainDepartment of Microbiology and Parasitology, ISTUN Institute of Tropical Health, University of Navarra, IdiSNA (Navarra Institute for Health Research). Pamplona, E-31008 Navarra, SpainDepartment of Microbiology and Parasitology, ISTUN Institute of Tropical Health, University of Navarra, IdiSNA (Navarra Institute for Health Research). Pamplona, E-31008 Navarra, SpainDepartment of Microbiology and Parasitology, ISTUN Institute of Tropical Health, University of Navarra, IdiSNA (Navarra Institute for Health Research). Pamplona, E-31008 Navarra, SpainDepartment of Microbiology and Parasitology, ISTUN Institute of Tropical Health, University of Navarra, IdiSNA (Navarra Institute for Health Research). Pamplona, E-31008 Navarra, SpainAggeu Magalhães Institute, Oswaldo Cruz Foundation (FIOCRUZ). Graduate Program in Applied Cellular and Molecular Biology (BCMA), University of Pernambuco (UPE), Recife/PE 50.670-420, BrazilInstitute of Chemistry, University of Tartu, Ravila 14a, Tartu 54011, EstoniaDepartment of Microbiology and Parasitology, ISTUN Institute of Tropical Health, University of Navarra, IdiSNA (Navarra Institute for Health Research). Pamplona, E-31008 Navarra, SpainThe identification and clarification of the mechanisms of action of drugs used against leishmaniasis may improve their administration regimens and prevent the development of resistant strains. Herein, for the first time, we describe the structure of the putatively essential Ser/Thr kinase LmjF.22.0810 from <i>Leishmania major</i>. Molecular dynamics simulations were performed to assess the stability of the kinase model. The analysis of its sequence and structure revealed two druggable sites on the protein. Furthermore, in silico docking of small molecules showed that aminoglycosides preferentially bind to the phosphorylation site of the protein. Given that transgenic LmjF.22.0810-overexpressing parasites displayed less sensitivity to aminoglycosides such as paromomycin, our predicted models support the idea that the mechanism of drug resistance observed in those transgenic parasites is the tight binding of such compounds to LmjF.22.0810 associated with its overexpression. These results may be helpful to understand the complex machinery of drug response in <i>Leishmania</i>.https://www.mdpi.com/2218-273X/9/11/723leishmaniantddockingmolecular dynamicsdrug resistanceparomomycinkinasetreatmentlmjf.22.0810lmjean3
collection DOAJ
language English
format Article
sources DOAJ
author Andrés Vacas
Celia Fernández-Rubio
Miriam Algarabel
José Peña-Guerrero
Esther Larrea
Fabio Rocha Formiga
Alfonso T. García-Sosa
Paul A. Nguewa
spellingShingle Andrés Vacas
Celia Fernández-Rubio
Miriam Algarabel
José Peña-Guerrero
Esther Larrea
Fabio Rocha Formiga
Alfonso T. García-Sosa
Paul A. Nguewa
The Novel Serine/Threonine Protein Kinase LmjF.22.0810 from <i>Leishmania major</i> may be Involved in the Resistance to Drugs such as Paromomycin
Biomolecules
leishmania
ntd
docking
molecular dynamics
drug resistance
paromomycin
kinase
treatment
lmjf.22.0810
lmjean3
author_facet Andrés Vacas
Celia Fernández-Rubio
Miriam Algarabel
José Peña-Guerrero
Esther Larrea
Fabio Rocha Formiga
Alfonso T. García-Sosa
Paul A. Nguewa
author_sort Andrés Vacas
title The Novel Serine/Threonine Protein Kinase LmjF.22.0810 from <i>Leishmania major</i> may be Involved in the Resistance to Drugs such as Paromomycin
title_short The Novel Serine/Threonine Protein Kinase LmjF.22.0810 from <i>Leishmania major</i> may be Involved in the Resistance to Drugs such as Paromomycin
title_full The Novel Serine/Threonine Protein Kinase LmjF.22.0810 from <i>Leishmania major</i> may be Involved in the Resistance to Drugs such as Paromomycin
title_fullStr The Novel Serine/Threonine Protein Kinase LmjF.22.0810 from <i>Leishmania major</i> may be Involved in the Resistance to Drugs such as Paromomycin
title_full_unstemmed The Novel Serine/Threonine Protein Kinase LmjF.22.0810 from <i>Leishmania major</i> may be Involved in the Resistance to Drugs such as Paromomycin
title_sort novel serine/threonine protein kinase lmjf.22.0810 from <i>leishmania major</i> may be involved in the resistance to drugs such as paromomycin
publisher MDPI AG
series Biomolecules
issn 2218-273X
publishDate 2019-11-01
description The identification and clarification of the mechanisms of action of drugs used against leishmaniasis may improve their administration regimens and prevent the development of resistant strains. Herein, for the first time, we describe the structure of the putatively essential Ser/Thr kinase LmjF.22.0810 from <i>Leishmania major</i>. Molecular dynamics simulations were performed to assess the stability of the kinase model. The analysis of its sequence and structure revealed two druggable sites on the protein. Furthermore, in silico docking of small molecules showed that aminoglycosides preferentially bind to the phosphorylation site of the protein. Given that transgenic LmjF.22.0810-overexpressing parasites displayed less sensitivity to aminoglycosides such as paromomycin, our predicted models support the idea that the mechanism of drug resistance observed in those transgenic parasites is the tight binding of such compounds to LmjF.22.0810 associated with its overexpression. These results may be helpful to understand the complex machinery of drug response in <i>Leishmania</i>.
topic leishmania
ntd
docking
molecular dynamics
drug resistance
paromomycin
kinase
treatment
lmjf.22.0810
lmjean3
url https://www.mdpi.com/2218-273X/9/11/723
work_keys_str_mv AT andresvacas thenovelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT celiafernandezrubio thenovelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT miriamalgarabel thenovelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT josepenaguerrero thenovelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT estherlarrea thenovelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT fabiorochaformiga thenovelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT alfonsotgarciasosa thenovelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT paulanguewa thenovelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT andresvacas novelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT celiafernandezrubio novelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT miriamalgarabel novelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT josepenaguerrero novelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT estherlarrea novelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT fabiorochaformiga novelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT alfonsotgarciasosa novelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
AT paulanguewa novelserinethreonineproteinkinaselmjf220810fromileishmaniamajorimaybeinvolvedintheresistancetodrugssuchasparomomycin
_version_ 1724999173716049920