Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae
Fifty six secondary metabolite biosynthesis gene clusters are predicted to be in the Aspergillus flavus genome. In spite of this, the biosyntheses of only seven metabolites, including the aflatoxins, kojic acid, cyclopiazonic acid and aflatrem, have been assigned to a particular gene cluster. We us...
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doaj-fad91e9c34bb446895960f0f90580a0c2020-11-25T02:24:46ZengMDPI AGToxins2072-66512014-06-01661916192810.3390/toxins6061916toxins6061916Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzaeKenneth C. Ehrlich0Brian M. Mack1Southern Regional Research Center, Agricultural Research Service, United States Department of Agriculture, New Orleans, LA 70124, USASouthern Regional Research Center, Agricultural Research Service, United States Department of Agriculture, New Orleans, LA 70124, USAFifty six secondary metabolite biosynthesis gene clusters are predicted to be in the Aspergillus flavus genome. In spite of this, the biosyntheses of only seven metabolites, including the aflatoxins, kojic acid, cyclopiazonic acid and aflatrem, have been assigned to a particular gene cluster. We used RNA-seq to compare expression of secondary metabolite genes in gene clusters for the closely related fungi A. parasiticus, A. oryzae, and A. flavus S and L sclerotial morphotypes. The data help to refine the identification of probable functional gene clusters within these species. Our results suggest that A. flavus, a prevalent contaminant of maize, cottonseed, peanuts and tree nuts, is capable of producing metabolites which, besides aflatoxin, could be an underappreciated contributor to its toxicity.http://www.mdpi.com/2072-6651/6/6/1916sclerotial morphotypesgene transcriptionnon-ribosomal peptide synthasepolyketide synthaseRNA-seq |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Kenneth C. Ehrlich Brian M. Mack |
spellingShingle |
Kenneth C. Ehrlich Brian M. Mack Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae Toxins sclerotial morphotypes gene transcription non-ribosomal peptide synthase polyketide synthase RNA-seq |
author_facet |
Kenneth C. Ehrlich Brian M. Mack |
author_sort |
Kenneth C. Ehrlich |
title |
Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae |
title_short |
Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae |
title_full |
Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae |
title_fullStr |
Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae |
title_full_unstemmed |
Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae |
title_sort |
comparison of expression of secondary metabolite biosynthesis cluster genes in aspergillus flavus, a. parasiticus, and a. oryzae |
publisher |
MDPI AG |
series |
Toxins |
issn |
2072-6651 |
publishDate |
2014-06-01 |
description |
Fifty six secondary metabolite biosynthesis gene clusters are predicted to be in the Aspergillus flavus genome. In spite of this, the biosyntheses of only seven metabolites, including the aflatoxins, kojic acid, cyclopiazonic acid and aflatrem, have been assigned to a particular gene cluster. We used RNA-seq to compare expression of secondary metabolite genes in gene clusters for the closely related fungi A. parasiticus, A. oryzae, and A. flavus S and L sclerotial morphotypes. The data help to refine the identification of probable functional gene clusters within these species. Our results suggest that A. flavus, a prevalent contaminant of maize, cottonseed, peanuts and tree nuts, is capable of producing metabolites which, besides aflatoxin, could be an underappreciated contributor to its toxicity. |
topic |
sclerotial morphotypes gene transcription non-ribosomal peptide synthase polyketide synthase RNA-seq |
url |
http://www.mdpi.com/2072-6651/6/6/1916 |
work_keys_str_mv |
AT kennethcehrlich comparisonofexpressionofsecondarymetabolitebiosynthesisclustergenesinaspergillusflavusaparasiticusandaoryzae AT brianmmack comparisonofexpressionofsecondarymetabolitebiosynthesisclustergenesinaspergillusflavusaparasiticusandaoryzae |
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