Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae

Fifty six secondary metabolite biosynthesis gene clusters are predicted to be in the Aspergillus flavus genome. In spite of this, the biosyntheses of only seven metabolites, including the aflatoxins, kojic acid, cyclopiazonic acid and aflatrem, have been assigned to a particular gene cluster. We us...

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Main Authors: Kenneth C. Ehrlich, Brian M. Mack
Format: Article
Language:English
Published: MDPI AG 2014-06-01
Series:Toxins
Subjects:
Online Access:http://www.mdpi.com/2072-6651/6/6/1916
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spelling doaj-fad91e9c34bb446895960f0f90580a0c2020-11-25T02:24:46ZengMDPI AGToxins2072-66512014-06-01661916192810.3390/toxins6061916toxins6061916Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzaeKenneth C. Ehrlich0Brian M. Mack1Southern Regional Research Center, Agricultural Research Service, United States Department of Agriculture, New Orleans, LA 70124, USASouthern Regional Research Center, Agricultural Research Service, United States Department of Agriculture, New Orleans, LA 70124, USAFifty six secondary metabolite biosynthesis gene clusters are predicted to be in the Aspergillus flavus genome. In spite of this, the biosyntheses of only seven metabolites, including the aflatoxins, kojic acid, cyclopiazonic acid and aflatrem, have been assigned to a particular gene cluster. We used RNA-seq to compare expression of secondary metabolite genes in gene clusters for the closely related fungi A. parasiticus, A. oryzae, and A. flavus S and L sclerotial morphotypes. The data help to refine the identification of probable functional gene clusters within these species. Our results suggest that A. flavus, a prevalent contaminant of maize, cottonseed, peanuts and tree nuts, is capable of producing metabolites which, besides aflatoxin, could be an underappreciated contributor to its toxicity.http://www.mdpi.com/2072-6651/6/6/1916sclerotial morphotypesgene transcriptionnon-ribosomal peptide synthasepolyketide synthaseRNA-seq
collection DOAJ
language English
format Article
sources DOAJ
author Kenneth C. Ehrlich
Brian M. Mack
spellingShingle Kenneth C. Ehrlich
Brian M. Mack
Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae
Toxins
sclerotial morphotypes
gene transcription
non-ribosomal peptide synthase
polyketide synthase
RNA-seq
author_facet Kenneth C. Ehrlich
Brian M. Mack
author_sort Kenneth C. Ehrlich
title Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae
title_short Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae
title_full Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae
title_fullStr Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae
title_full_unstemmed Comparison of Expression of Secondary Metabolite Biosynthesis Cluster Genes in Aspergillus flavus, A. parasiticus, and A. oryzae
title_sort comparison of expression of secondary metabolite biosynthesis cluster genes in aspergillus flavus, a. parasiticus, and a. oryzae
publisher MDPI AG
series Toxins
issn 2072-6651
publishDate 2014-06-01
description Fifty six secondary metabolite biosynthesis gene clusters are predicted to be in the Aspergillus flavus genome. In spite of this, the biosyntheses of only seven metabolites, including the aflatoxins, kojic acid, cyclopiazonic acid and aflatrem, have been assigned to a particular gene cluster. We used RNA-seq to compare expression of secondary metabolite genes in gene clusters for the closely related fungi A. parasiticus, A. oryzae, and A. flavus S and L sclerotial morphotypes. The data help to refine the identification of probable functional gene clusters within these species. Our results suggest that A. flavus, a prevalent contaminant of maize, cottonseed, peanuts and tree nuts, is capable of producing metabolites which, besides aflatoxin, could be an underappreciated contributor to its toxicity.
topic sclerotial morphotypes
gene transcription
non-ribosomal peptide synthase
polyketide synthase
RNA-seq
url http://www.mdpi.com/2072-6651/6/6/1916
work_keys_str_mv AT kennethcehrlich comparisonofexpressionofsecondarymetabolitebiosynthesisclustergenesinaspergillusflavusaparasiticusandaoryzae
AT brianmmack comparisonofexpressionofsecondarymetabolitebiosynthesisclustergenesinaspergillusflavusaparasiticusandaoryzae
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