Conservation implications of genetic structure in the narrowest endemic quillwort from the Eastern Amazon

Abstract The quillwort Isoëtes cangae is a critically endangered species occurring in a single lake in Serra dos Carajás, Eastern Amazon. Low genetic diversity and small effective population sizes (Ne) are expected for narrow endemic species (NES). Conservation biology studies centered in a single s...

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Main Authors: Jeronymo Dalapicolla, Ronnie Alves, Rodolfo Jaffé, Santelmo Vasconcelos, Eder Soares Pires, Gisele Lopes Nunes, Jovani Bernardino de Souza Pereira, José Tasso F. Guimarães, Mariana C. Dias, Taís Nogueira Fernandes, Daniela Scherer, Fernando Marino Gomes dosSantos, Alexandre Castilho, Mirella Pupo Santos, Emiliano Nicolas Calderón, Rodrigo Lemes Martins, Rodrigo Nunes daFonseca, Francisco de Assis Esteves, Cecílio Frois Caldeira, Guilherme Oliveira
Format: Article
Language:English
Published: Wiley 2021-08-01
Series:Ecology and Evolution
Subjects:
Online Access:https://doi.org/10.1002/ece3.7812
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spelling doaj-fc31bfcc1f80450dbd412b7e28bf99132021-08-02T18:48:03ZengWileyEcology and Evolution2045-77582021-08-011115101191013210.1002/ece3.7812Conservation implications of genetic structure in the narrowest endemic quillwort from the Eastern AmazonJeronymo Dalapicolla0Ronnie Alves1Rodolfo Jaffé2Santelmo Vasconcelos3Eder Soares Pires4Gisele Lopes Nunes5Jovani Bernardino de Souza Pereira6José Tasso F. Guimarães7Mariana C. Dias8Taís Nogueira Fernandes9Daniela Scherer10Fernando Marino Gomes dosSantos11Alexandre Castilho12Mirella Pupo Santos13Emiliano Nicolas Calderón14Rodrigo Lemes Martins15Rodrigo Nunes daFonseca16Francisco de Assis Esteves17Cecílio Frois Caldeira18Guilherme Oliveira19Instituto Tecnológico Vale Belém BrazilInstituto Tecnológico Vale Belém BrazilInstituto Tecnológico Vale Belém BrazilInstituto Tecnológico Vale Belém BrazilInstituto Tecnológico Vale Belém BrazilInstituto Tecnológico Vale Belém BrazilInstituto de Botânica de São Paulo São Paulo BrazilInstituto Tecnológico Vale Belém BrazilInstituto Tecnológico Vale Belém BrazilVALE S/A Gerência de Estudos Ambientais Licenciamento e Espeleologia Nova Lima BrazilVALE S/A Gerência de Estudos Ambientais Licenciamento e Espeleologia Nova Lima BrazilVALE S/A Gerência de Estudos Ambientais Licenciamento e Espeleologia Nova Lima BrazilVALE S/A Gerência de Estudos Ambientais Licenciamento e Espeleologia Nova Lima BrazilInstituto de Biodiversidade e Sustentabilidade NUPEM Universidade Federal do Rio de Janeiro Macaé BrazilInstituto de Biodiversidade e Sustentabilidade NUPEM Universidade Federal do Rio de Janeiro Macaé BrazilInstituto de Biodiversidade e Sustentabilidade NUPEM Universidade Federal do Rio de Janeiro Macaé BrazilInstituto de Biodiversidade e Sustentabilidade NUPEM Universidade Federal do Rio de Janeiro Macaé BrazilInstituto de Biodiversidade e Sustentabilidade NUPEM Universidade Federal do Rio de Janeiro Macaé BrazilInstituto Tecnológico Vale Belém BrazilInstituto Tecnológico Vale Belém BrazilAbstract The quillwort Isoëtes cangae is a critically endangered species occurring in a single lake in Serra dos Carajás, Eastern Amazon. Low genetic diversity and small effective population sizes (Ne) are expected for narrow endemic species (NES). Conservation biology studies centered in a single species show some limitations, but they are still useful considering the limited time and resources available for protection of species at risk of extinction. Here, we evaluated the genetic diversity, population structure, Ne, and minimum viable population (MVP) of I. cangae to provide information for effective conservation programs. Our analyses were based on 55 individuals collected from the Amendoim Lake and 35,638 neutral SNPs. Our results indicated a single panmictic population, moderate levels of genetic diversity, and Ne in the order of thousands, contrasting the expected for NES. Negative FIS values were also found, suggesting that I. cangae is not under risk of inbreeding depression. Our findings imply that I. cangae contains enough genetic diversity to ensure evolutionary potential and that all individuals should be treated as one demographic unit. These results provide essential information to optimize ex situ conservation efforts and genetic diversity monitoring, which are currently applied to guide I. cangae conservation plans.https://doi.org/10.1002/ece3.7812conservation geneticseffective population sizegenomic skimmingisoetaceaenarrow endemic species (NES)
collection DOAJ
language English
format Article
sources DOAJ
author Jeronymo Dalapicolla
Ronnie Alves
Rodolfo Jaffé
Santelmo Vasconcelos
Eder Soares Pires
Gisele Lopes Nunes
Jovani Bernardino de Souza Pereira
José Tasso F. Guimarães
Mariana C. Dias
Taís Nogueira Fernandes
Daniela Scherer
Fernando Marino Gomes dosSantos
Alexandre Castilho
Mirella Pupo Santos
Emiliano Nicolas Calderón
Rodrigo Lemes Martins
Rodrigo Nunes daFonseca
Francisco de Assis Esteves
Cecílio Frois Caldeira
Guilherme Oliveira
spellingShingle Jeronymo Dalapicolla
Ronnie Alves
Rodolfo Jaffé
Santelmo Vasconcelos
Eder Soares Pires
Gisele Lopes Nunes
Jovani Bernardino de Souza Pereira
José Tasso F. Guimarães
Mariana C. Dias
Taís Nogueira Fernandes
Daniela Scherer
Fernando Marino Gomes dosSantos
Alexandre Castilho
Mirella Pupo Santos
Emiliano Nicolas Calderón
Rodrigo Lemes Martins
Rodrigo Nunes daFonseca
Francisco de Assis Esteves
Cecílio Frois Caldeira
Guilherme Oliveira
Conservation implications of genetic structure in the narrowest endemic quillwort from the Eastern Amazon
Ecology and Evolution
conservation genetics
effective population size
genomic skimming
isoetaceae
narrow endemic species (NES)
author_facet Jeronymo Dalapicolla
Ronnie Alves
Rodolfo Jaffé
Santelmo Vasconcelos
Eder Soares Pires
Gisele Lopes Nunes
Jovani Bernardino de Souza Pereira
José Tasso F. Guimarães
Mariana C. Dias
Taís Nogueira Fernandes
Daniela Scherer
Fernando Marino Gomes dosSantos
Alexandre Castilho
Mirella Pupo Santos
Emiliano Nicolas Calderón
Rodrigo Lemes Martins
Rodrigo Nunes daFonseca
Francisco de Assis Esteves
Cecílio Frois Caldeira
Guilherme Oliveira
author_sort Jeronymo Dalapicolla
title Conservation implications of genetic structure in the narrowest endemic quillwort from the Eastern Amazon
title_short Conservation implications of genetic structure in the narrowest endemic quillwort from the Eastern Amazon
title_full Conservation implications of genetic structure in the narrowest endemic quillwort from the Eastern Amazon
title_fullStr Conservation implications of genetic structure in the narrowest endemic quillwort from the Eastern Amazon
title_full_unstemmed Conservation implications of genetic structure in the narrowest endemic quillwort from the Eastern Amazon
title_sort conservation implications of genetic structure in the narrowest endemic quillwort from the eastern amazon
publisher Wiley
series Ecology and Evolution
issn 2045-7758
publishDate 2021-08-01
description Abstract The quillwort Isoëtes cangae is a critically endangered species occurring in a single lake in Serra dos Carajás, Eastern Amazon. Low genetic diversity and small effective population sizes (Ne) are expected for narrow endemic species (NES). Conservation biology studies centered in a single species show some limitations, but they are still useful considering the limited time and resources available for protection of species at risk of extinction. Here, we evaluated the genetic diversity, population structure, Ne, and minimum viable population (MVP) of I. cangae to provide information for effective conservation programs. Our analyses were based on 55 individuals collected from the Amendoim Lake and 35,638 neutral SNPs. Our results indicated a single panmictic population, moderate levels of genetic diversity, and Ne in the order of thousands, contrasting the expected for NES. Negative FIS values were also found, suggesting that I. cangae is not under risk of inbreeding depression. Our findings imply that I. cangae contains enough genetic diversity to ensure evolutionary potential and that all individuals should be treated as one demographic unit. These results provide essential information to optimize ex situ conservation efforts and genetic diversity monitoring, which are currently applied to guide I. cangae conservation plans.
topic conservation genetics
effective population size
genomic skimming
isoetaceae
narrow endemic species (NES)
url https://doi.org/10.1002/ece3.7812
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