BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows

BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows

Summary: Image analysis is key to extracting quantitative information from scientific microscopy images, but the methods involved are now often so refined that they can no longer be unambiguously described by written protocols. We introduce BIAFLOWS, an open-source web tool enabling to reproducibly...

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Bibliographic Details
Main Authors: Ulysse Rubens, Romain Mormont, Lassi Paavolainen, Volker Bäcker, Benjamin Pavie, Leandro A. Scholz, Gino Michiels, Martin Maška, Devrim Ünay, Graeme Ball, Renaud Hoyoux, Rémy Vandaele, Ofra Golani, Stefan G. Stanciu, Natasa Sladoje, Perrine Paul-Gilloteaux, Raphaël Marée, Sébastien Tosi
Format: Article
Language:English
Published: Elsevier 2020-06-01
Series:Patterns
Subjects:
image analysis
software
benchmarking
deployment
reproducibility
web application
Online Access:http://www.sciencedirect.com/science/article/pii/S2666389920300453

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